PyDigger - unearthing stuff about Python


NameVersionSummarydate
sadic 2.0.0 Reimplementation as a python package of the software for Simple Atom Depth Index Calculator (SADIC) 2024-03-25 14:12:51
cazy-webscraper 2.3.0.3 A tool to automate retrieving data from CAZy, build a local CAZyme SQL database, and throughly interrogating the data. Also, automate retrieving protein data, sequences, EC numbers and structure files for specific datasets in the CAZyme database from UniProt, GenBank and PDB. 2024-03-25 08:45:28
mDeepFRI 1.1.4 Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN. 2024-03-23 19:08:57
pixelgen-pixelator 0.16.2 A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays. 2024-03-19 12:35:30
gradio-molecule3d 0.0.5 Molecule3D custom component to visualize pdb or sdf files using 3Dmol.js 2024-03-16 19:31:50
py3Dmol 2.1.0 An IPython interface for embedding 3Dmol.js views in Jupyter notebooks 2024-03-12 12:28:02
protkit 0.2.1 A unified toolkit for structural protein engineering. 2024-03-08 07:13:33
apalib 0.1.0 2024-03-06 21:31:04
proteinflow 2.8.0 Versatile pipeline for processing protein structure data for deep learning applications. 2024-02-08 09:49:55
pyfamsa 0.3.2 Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments. 2024-01-27 14:10:09
pdbe-arpeggio 1.4.4 Arpeggio calculates interatomic contacts based on the rules defined in CREDO. 2024-01-24 13:16:16
py-packman 1.4.12 A software package for molecular PACKing and Motion ANalysis (PACKMAN) 2024-01-19 07:25:54
protmapper 0.0.29 Map protein sites to human reference sequence. 2024-01-19 04:49:14
icn3dpy 3.29.0 An IPython interface for embedding iCn3D viewer 2024-01-11 18:37:13
prospr 1.2.1 A toolbox for protein folding with Python. 2024-01-03 10:26:55
rpg 2.0.3 In silico protein digestion 2023-12-18 09:09:22
gauche 0.1.6 Gaussian Process Library for Molecules, Chemical Reactions and Proteins. 2023-12-11 00:36:18
deepprotein 0.0.0 General Framework for Deep Learning on Macro Molecules 2023-12-01 08:32:05
omnipath 1.0.8 Python client for the OmniPath web service 2023-11-20 18:42:58
sadie-antibody 1.0.6 "The Complete Antibody Library" 2023-10-06 18:06:23
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