| Name | Version | Summary | date |
| sphae |
1.31 |
Assembling pure culture phages from both Illumina and Nanopore sequencing technology |
2023-11-30 02:26:41 |
| geofetch |
0.12.5 |
Downloads data and metadata from GEO and SRA and creates standard PEPs. |
2023-11-29 18:12:18 |
| xlavir |
1.0.1 |
Excel report from viral sequencing analysis output |
2023-11-28 23:38:12 |
| pyrodigal-gv |
0.3.0 |
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code. |
2023-11-27 15:28:42 |
| versionix |
0.2.3 |
Get version of any tools |
2023-11-26 15:24:46 |
| MetaCHIP2 |
2.3.8 |
HGT detection pipeline |
2023-11-24 03:28:09 |
| singlem |
0.16.0 |
Novelty-inclusive microbial community profiling of shotgun metagenomes |
2023-11-24 01:36:48 |
| pySAR |
2.4.3 |
A Python package used to analysis Sequence Activity Relationships (SARs) of protein sequences and their mutants using Machine Learning. |
2023-11-23 17:16:04 |
| pybio |
0.3.13 |
pybio genomics |
2023-11-23 08:16:09 |
| breedgym |
0.0.1a0 |
Suite of Gymnasium environments for optimizing breeding programs |
2023-11-23 00:52:44 |
| pairtools |
1.0.3 |
CLI tools to process mapped Hi-C data |
2023-11-20 19:32:48 |
| metabolitics3d |
0.0.12 |
metabolitics3d |
2023-11-19 22:39:33 |
| proteinshake |
0.3.14 |
Protein structure datasets for machine learning. |
2023-11-18 19:07:54 |
| pymantra |
1.0.2 |
Reaction-Centred Metabolic Network Analysis |
2023-11-17 09:43:01 |
| biocode |
0.11.0 |
Bioinformatics code libraries and scripts |
2023-11-17 05:53:35 |
| eido |
0.2.2 |
A project metadata validator |
2023-11-16 21:28:43 |
| methylink |
0.5.0 |
methylink is a tool to link methylation tags between SAM/BAM files. |
2023-11-14 22:29:55 |
| hic2cool |
1.0.1 |
Converter between hic files (from juicer) and single-resolution or multi-resolution cool files (for cooler). Both hic and cool files describe Hi-C contact matrices. Intended to be lightweight, this can be used as an imported package or a stand-alone Python tool for command line conversion. |
2023-11-14 21:35:42 |
| TFBS-footprinting3 |
0.0.5 |
Tool for identifying conserved TFBSs in vertebrate species. |
2023-11-14 19:26:08 |
| nextflowpy |
0.8.1 |
A Python wrapper around Nextflow. |
2023-11-14 14:31:44 |