PyDigger - unearthing stuff about Python


NameVersionSummarydate
gpubs 6 Pipeline to download and annotate gene-related publications 2023-08-06 14:39:34
hchacha 1.0.5 Human CHromosome Accession CHAnge - Convert between different human chromosome naming systems (of the same assembly/version) 2023-07-22 18:37:15
snipar 0.0.18 Library and command line scripts for inferring identity-by-descent (IBD) segments shared between siblings, imputing missing parental genotypes, and for performing family based genome-wide association and polygenic score analyses. 2023-07-11 18:30:28
openoligo 0.1.6 An open-source platform for programmatically interacting with and managing Nucleic acid sequences synthesis processes. 2023-07-04 18:44:41
DendroPy 4.6.1 A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters. 2023-06-09 05:34:21
bio-aid 0.3.0 Genetic Analysis Tools 2023-05-23 20:58:42
geneparse 0.8.2 A suite of parse for genotype formats. 2023-05-19 18:14:24
cbgen 1.0.4 Python wrapper around a BGEN library 2023-05-10 18:50:50
bamnostic 1.1.10 Pure Python, OS-agnostic Binary Alignment Map (BAM) random access and parsing tool 2023-04-26 15:26:55
DendroPy-calver 2023.330.2 A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters. Calendar-versioned fork tracking DendroPy main branch. 2023-03-30 06:22:01
ibdcluster 1.2.9 A CLI tool to help identify ibd sharing within networks across a locus of interest at biobank scale and then test for phenotypic enrichment within these networks. 2023-03-28 21:44:54
variant-extractor 4.0.6 Deterministic and standard extractor of indels, SNVs and structural variants (SVs) from VCF files 2023-03-08 12:45:17
genetictabler 1.1.1 A time table scheduler using Genetic algorithm(s). 2023-01-03 15:43:03
pandas-plink 2.2.9 Read PLINK files into Pandas data frames 2021-07-02 01:23:10
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