| Name | Version | Summary | date |
| genomicsdb |
0.0.9.11 |
Experimental Python Bindings for querying GenomicsDB |
2024-04-18 07:47:34 |
| pybbi |
0.4.0 |
Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files. |
2024-04-14 11:55:51 |
| omicidx |
1.11.3 |
The OmicIDX project collects, reprocesses, and then republishes metadata from multiple public genomics repositories. Included are the NCBI SRA, Biosample, and GEO databases. Publication is via the cloud data warehouse platform Bigquery, a set of performant search and retrieval APIs, and a set of json-format files for easy incorporation into other projects. |
2024-04-12 13:17:54 |
| hiscanner |
0.2a0 |
High-resolution copy number variant calling in single-cell whole-genome sequencing. |
2024-04-11 15:38:05 |
| cgat |
0.7.2 |
cgat : the Computational Genomics Analysis Toolkit |
2024-04-05 10:31:20 |
| bycon |
1.6.5 |
A Python-based environment for the Beacon v2 genomics API |
2024-04-03 07:16:53 |
| cgatcore |
0.6.16 |
cgatcore : the Computational Genomics Analysis Toolkit |
2024-04-02 07:28:45 |
| geonomics |
1.4.0 |
A package for landscape genomic simulation |
2024-04-01 13:07:15 |
| sevenbridges-python |
2.11.0 |
SBG API python client bindings |
2024-03-18 15:19:29 |
| SuperPang |
1.3.0 |
Non-redundant pangenome assemblies from multiple genomes or bins |
2024-03-18 11:34:41 |
| pegasuspy |
1.9.1.post1 |
Pegasus is a Python package for analyzing sc/snRNA-seq data of millions of cells |
2024-03-16 08:16:11 |
| neosv |
0.0.4 |
Neoantigens from Structural Variations |
2024-03-15 08:39:27 |
| sbsgenerator |
1.0.5 |
Blazingly fast SBS matrix generator library |
2024-03-14 22:57:36 |
| cellxgene-gateway |
0.4.0 |
Cellxgene Gateway |
2024-03-10 13:37:09 |
| cptac |
1.5.13 |
Python packaging for CPTAC data |
2024-03-04 16:11:34 |
| odm-sdk |
0.0.1 |
SDK for interacting with the Open Data Manager |
2024-02-22 14:36:22 |
| phic |
2.0.13 |
Polymer dynamics deciphered from Hi-C data |
2024-02-09 09:18:30 |
| igv-reports |
1.12.0 |
Creates self-contained html pages for visual variant review with IGV (igv.js). |
2024-02-08 21:10:00 |
| bed-reader |
1.0.2 |
Read and write the PLINK BED format, simply and efficiently. |
2024-02-06 03:14:09 |
| cogent3 |
2024.2.5a1 |
COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs. |
2024-02-05 00:15:39 |