TFdisc


NameTFdisc JSON
Version 1.0.0 PyPI version JSON
download
home_pagehttps://github.com/ocean-debug/TFdisc
Summaryin silico transcription factor (TF) perturbation simulator
upload_time2024-09-09 07:14:04
maintainerNone
docs_urlNone
authorHaiyang Wang
requires_python>=3.6
licenseNone
keywords
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # TFdisc 

***
TFdisc is a python library for Transcription factor perturbation simulation. TFdisc uses wild-type single-cell RNA sequencing (scRNA-seq) data to emulate corresponding scRNA-seq transcriptomes post-TF perturbations.TFdisc generates inferred transcriptomes for individual cells with single or multiple TFs perturbed. This simulated perturbed single-cell expression data mirrors actual experimental results, facilitating a wide range of downstream analyses.

## Installation

pip install TFdisc

            

Raw data

            {
    "_id": null,
    "home_page": "https://github.com/ocean-debug/TFdisc",
    "name": "TFdisc",
    "maintainer": null,
    "docs_url": null,
    "requires_python": ">=3.6",
    "maintainer_email": null,
    "keywords": null,
    "author": "Haiyang Wang",
    "author_email": "your.email@example.com",
    "download_url": "https://files.pythonhosted.org/packages/50/3b/4f16656dca563d9cf8da13c12a6ae85a85ba4bc2d247b7d0c386618f1437/tfdisc-1.0.0.tar.gz",
    "platform": null,
    "description": "# TFdisc \n\n***\nTFdisc is a python library for Transcription factor perturbation simulation. TFdisc uses wild-type single-cell RNA sequencing (scRNA-seq) data to emulate corresponding scRNA-seq transcriptomes post-TF perturbations.TFdisc generates inferred transcriptomes for individual cells with single or multiple TFs perturbed. This simulated perturbed single-cell expression data mirrors actual experimental results, facilitating a wide range of downstream analyses.\n\n## Installation\n\npip install TFdisc\n",
    "bugtrack_url": null,
    "license": null,
    "summary": "in silico transcription factor (TF) perturbation simulator",
    "version": "1.0.0",
    "project_urls": {
        "Homepage": "https://github.com/ocean-debug/TFdisc"
    },
    "split_keywords": [],
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "4c0e5144a21976db2fb38c8a932f433f6aa9dff0befcf4f9ca300315d5dd3216",
                "md5": "8fa7a317ad626b91d301e2069ff96700",
                "sha256": "51dbc4f950027774b4873334fe59284997fb3eb6045c2955bd2b7cfc27ee487c"
            },
            "downloads": -1,
            "filename": "TFdisc-1.0.0-py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "8fa7a317ad626b91d301e2069ff96700",
            "packagetype": "bdist_wheel",
            "python_version": "py3",
            "requires_python": ">=3.6",
            "size": 19216,
            "upload_time": "2024-09-09T07:14:03",
            "upload_time_iso_8601": "2024-09-09T07:14:03.021309Z",
            "url": "https://files.pythonhosted.org/packages/4c/0e/5144a21976db2fb38c8a932f433f6aa9dff0befcf4f9ca300315d5dd3216/TFdisc-1.0.0-py3-none-any.whl",
            "yanked": false,
            "yanked_reason": null
        },
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "503b4f16656dca563d9cf8da13c12a6ae85a85ba4bc2d247b7d0c386618f1437",
                "md5": "4bb0ea9c181dd755088b82a5951906b7",
                "sha256": "d4ddab3d92099087ab8d42680f7993d8676ee81e9edcff95a0853e1213596f6f"
            },
            "downloads": -1,
            "filename": "tfdisc-1.0.0.tar.gz",
            "has_sig": false,
            "md5_digest": "4bb0ea9c181dd755088b82a5951906b7",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": ">=3.6",
            "size": 18683,
            "upload_time": "2024-09-09T07:14:04",
            "upload_time_iso_8601": "2024-09-09T07:14:04.418319Z",
            "url": "https://files.pythonhosted.org/packages/50/3b/4f16656dca563d9cf8da13c12a6ae85a85ba4bc2d247b7d0c386618f1437/tfdisc-1.0.0.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2024-09-09 07:14:04",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "github_user": "ocean-debug",
    "github_project": "TFdisc",
    "travis_ci": false,
    "coveralls": false,
    "github_actions": false,
    "lcname": "tfdisc"
}
        
Elapsed time: 0.40480s