imio


Nameimio JSON
Version 0.3.0 PyPI version JSON
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home_page
SummaryLoading and saving of image data.
upload_time2023-08-14 12:24:34
maintainer
docs_urlNone
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requires_python>=3.8
license
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requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            [![Python Version](https://img.shields.io/pypi/pyversions/imio.svg)](https://pypi.org/project/imio)
[![PyPI](https://img.shields.io/pypi/v/imio.svg)](https://pypi.org/project/imio)
[![Downloads](https://pepy.tech/badge/imio)](https://pepy.tech/project/imio)
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[![Development Status](https://img.shields.io/pypi/status/imio.svg)](https://github.com/brainglobe/imio)
[![Tests](https://img.shields.io/github/workflow/status/brainglobe/imio/tests)](https://github.com/brainglobe/imio/actions)
[![codecov](https://codecov.io/gh/brainglobe/imio/branch/master/graph/badge.svg?token=M1BXRDJ9V4)](https://codecov.io/gh/brainglobe/imio)[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/python/black)
[![Contributions](https://img.shields.io/badge/Contributions-Welcome-brightgreen.svg)](https://github.com/brainglobe/imio)

# imio
Loading and saving of image data.

### About
The aim of imio is to be a lightweight image loading library for the file types
 supported by [cellfinder](https://github.com/brainglobe/cellfinder), and
 [brainreg](https://github.com/brainglobe/brainreg).

#### Supports loading of:
* Tiff stack `+`
* Tiff series (from a directory, a text file or a list of file paths). `*+`
* nrrd
* nifti (`.nii` & `.nii.gz`)

`*` Supports loading in parallel for speed

`+` Suports scaling on loading. E.g. downsampling to load images bigger than the
available RAM

#### Supports saving of:
* Tiff stack
* Tiff series
* nifti

### To install
```bash
pip install imio
```

## Contributing
Contributions to imio are more than welcome. Please see the [developers guide](https://brainglobe.info/developers/index.html).

            

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