# pyseqrna
pySeqRNA: a python-based package for RNASeq data analysis
## Installation
Download the installer: [Miniconda installer for Linux.](https://docs.conda.io/en/latest/miniconda.html#linux-installers)
conda env create -f pyseqrna_environment.yml
conda activate pyseqrna_0.0.2
pip install .
## Run pyseqrna
pyseqrna -h
## Please Cite
Duhan N and Kaundal R. pySeqRNA: an automated Python package for RNA sequencing data analysis [version 1; not peer reviewed]. F1000Research 2020, 9(ISCB Comm J):1128 (poster) (https://doi.org/10.7490/f1000research.1118314.1)
## Contact
Written by Naveen Duhan (naveen.duhan@usu.edu),
Kaundal Bioinformatics Lab, Utah State University,
Released under the terms of GNU General Public Licence v3
Raw data
{
"_id": null,
"home_page": "http://bioinfo.usu.edu/pyseqrna",
"name": "pySeqRNA",
"maintainer": "",
"docs_url": null,
"requires_python": ">=3.8",
"maintainer_email": "",
"keywords": "",
"author": "Naveen Duhan",
"author_email": "naveen.duhan@usu.edu",
"download_url": "https://files.pythonhosted.org/packages/0f/e9/7a87595707b17d6e422d1b57827b2ec68418d6e5206293645ea6ddc5aca9/pySeqRNA-0.0.2.tar.gz",
"platform": null,
"description": "# pyseqrna\n\npySeqRNA: a python-based package for RNASeq data analysis\n\n\n## Installation\n\nDownload the installer: [Miniconda installer for Linux.](https://docs.conda.io/en/latest/miniconda.html#linux-installers)\n\nconda env create -f pyseqrna_environment.yml\n\nconda activate pyseqrna_0.0.2\n\npip install . \n\n## Run pyseqrna\n\npyseqrna -h\n\n## Please Cite\n\nDuhan N and Kaundal R. pySeqRNA: an automated Python package for RNA sequencing data analysis [version 1; not peer reviewed]. F1000Research 2020, 9(ISCB Comm J):1128 (poster) (https://doi.org/10.7490/f1000research.1118314.1) \n\n## Contact\n\nWritten by Naveen Duhan (naveen.duhan@usu.edu),\nKaundal Bioinformatics Lab, Utah State University,\nReleased under the terms of GNU General Public Licence v3\n",
"bugtrack_url": null,
"license": "MIT",
"summary": "pySeqRNA a python based RNA analysis package",
"version": "0.0.2",
"split_keywords": [],
"urls": [
{
"comment_text": "",
"digests": {
"blake2b_256": "1d3f37d1baefd90f275cfd0d87b040fe030c54551ed957589d23b3215b4ce7bd",
"md5": "a3165c9370a74b083b076269f6a6cee0",
"sha256": "fba65b71d933ce3c7f475b619cc0cbdcce855886256a489935608158e80c65cf"
},
"downloads": -1,
"filename": "pySeqRNA-0.0.2-py3-none-any.whl",
"has_sig": false,
"md5_digest": "a3165c9370a74b083b076269f6a6cee0",
"packagetype": "bdist_wheel",
"python_version": "py3",
"requires_python": ">=3.8",
"size": 65323,
"upload_time": "2023-02-01T08:43:07",
"upload_time_iso_8601": "2023-02-01T08:43:07.759618Z",
"url": "https://files.pythonhosted.org/packages/1d/3f/37d1baefd90f275cfd0d87b040fe030c54551ed957589d23b3215b4ce7bd/pySeqRNA-0.0.2-py3-none-any.whl",
"yanked": false,
"yanked_reason": null
},
{
"comment_text": "",
"digests": {
"blake2b_256": "0fe97a87595707b17d6e422d1b57827b2ec68418d6e5206293645ea6ddc5aca9",
"md5": "ac7d8f3ab2d9417e2ae2a5e53dcb9de9",
"sha256": "c6e869ecee5c889a32c9468a52d40a9a6cf292243db6281b1de91cc83a4f7367"
},
"downloads": -1,
"filename": "pySeqRNA-0.0.2.tar.gz",
"has_sig": false,
"md5_digest": "ac7d8f3ab2d9417e2ae2a5e53dcb9de9",
"packagetype": "sdist",
"python_version": "source",
"requires_python": ">=3.8",
"size": 52799,
"upload_time": "2023-02-01T08:43:12",
"upload_time_iso_8601": "2023-02-01T08:43:12.397023Z",
"url": "https://files.pythonhosted.org/packages/0f/e9/7a87595707b17d6e422d1b57827b2ec68418d6e5206293645ea6ddc5aca9/pySeqRNA-0.0.2.tar.gz",
"yanked": false,
"yanked_reason": null
}
],
"upload_time": "2023-02-01 08:43:12",
"github": false,
"gitlab": false,
"bitbucket": false,
"lcname": "pyseqrna"
}