| Name | Version | Summary | date |
| ampgen |
0.1.14 |
A de novo generation pipeline leveraging evolutionary information for broad-spectrum antimicrobial peptide design |
2025-08-01 08:30:11 |
| kmerdb |
0.9.5 |
Yet another k-mer counter for Genomics, Metagenomics, and Phylogenomics applications... |
2025-08-01 00:25:40 |
| biobb-adapters |
5.1.0 |
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow managers. |
2025-07-31 14:22:14 |
| genome-uploader |
2.4.0 |
Python script to upload bins and MAGs in fasta format to ENA (European Nucleotide Archive). This script generates xmls and manifests necessary for submission with webin-cli. |
2025-07-31 10:52:12 |
| genomic-benchmarks |
1.0.0 |
Genomic Benchmarks |
2025-07-30 12:24:26 |
| geo-mcp |
0.1.0 |
A Model Context Protocol (MCP) server for accessing GEO (Gene Expression Omnibus) data through NCBI E-Utils API |
2025-07-30 11:49:55 |
| omixvizpy |
0.1.0 |
A Python package for omics data visualization with a focus on PCA plotting |
2025-07-30 11:45:38 |
| intronator |
0.2.1 |
A Python package for comprehensive splice site analysis and simulation |
2025-07-29 14:51:21 |
| snipit-mc |
0.0.4 |
Enhanced snipit with artistic color palettes and improved SNP visualization |
2025-07-29 12:09:55 |
| ga4gh.va-spec |
0.4.2 |
GA4GH Variant Annotation (VA) reference implementation |
2025-07-29 11:38:54 |
| gene-fetch |
1.0.14 |
Gene Fetch: High-throughput NCBI Sequence Retrieval Tool |
2025-07-28 12:34:51 |
| PREDICT |
3.2.0 |
Predict: a Radiomics Extensive Digital Interchangable Classification Toolkit. |
2025-07-28 11:31:33 |
| pyranges1 |
1.1.3 |
GenomicRanges for Python. |
2025-07-28 07:16:56 |
| OGU |
2.0.2 |
Organelle Genome Utilities |
2025-07-26 04:49:51 |
| pyprophet |
3.0.1 |
PyProphet: Semi-supervised learning and scoring of OpenSWATH results. |
2025-07-24 20:12:14 |
| pyCirclizely |
1.0.3 |
Circular visualization in Python, plotly implemented |
2025-07-22 14:50:45 |
| biocode |
0.12.1 |
Bioinformatics code libraries and scripts |
2025-07-22 14:32:54 |
| cpg-utils |
5.4.1 |
Library of convenience functions specific to the CPG |
2025-07-17 07:18:03 |
| bactopia |
1.6.0 |
A Python package for working with Bactopia |
2025-07-16 19:37:35 |
| vecmap |
1.0.0 |
Ultrafast exact sequence matching in pure Python using NumPy vectorization |
2025-07-16 02:42:36 |