| Name | Version | Summary | date |
| fdstools |
2.1.0 |
Forensic DNA Sequencing Tools |
2024-04-30 20:53:10 |
| prophyle |
0.3.3.2 |
ProPhyle metagenomic classifier |
2024-04-21 15:31:41 |
| anacore |
3.1.0 |
Libraries for managing standard file formats and objects from NGS. |
2024-03-20 09:04:17 |
| sequana |
0.16.11 |
A set of standalone application and pipelines dedicated to NGS analysis |
2024-03-18 15:24:53 |
| checkQC |
4.0.1 |
A simple program to parse Illumina NGS data and check it for quality criteria. |
2024-03-18 14:27:35 |
| bacpage |
2024.3.8 |
An easy-to-use pipeline for the assembly and analysis of bacterial genomes |
2024-03-11 12:53:35 |
| custardpy |
0.7.2 |
Hi-C analysis tools by Python3 |
2024-03-04 22:36:13 |
| bedboss |
0.1.0 |
Pipelines for genomic region file to produce bed files, and it's statistics |
2024-02-29 16:50:49 |
| geniml |
0.2.0 |
Genomic interval toolkit |
2024-02-28 21:46:18 |
| ngs-analysis |
0.0.6 |
Analyze deep sequencing of complex libraries |
2024-02-09 15:33:49 |
| sequana-mapper |
1.2.1 |
A multi-sample mapper to map reads onto a reference |
2024-02-07 21:23:56 |
| yacman |
0.9.3 |
A standardized configuration object for reference genome assemblies |
2024-02-01 21:36:51 |
| sequana-variant-calling |
1.2.0 |
A multi-sample variant calling pipeline |
2024-01-31 08:46:23 |
| looper |
1.7.0 |
A pipeline submission engine that parses sample inputs and submits pipelines for each sample. |
2024-01-26 14:45:19 |
| peppy |
0.40.1 |
A python-based project metadata manager for portable encapsulated projects |
2024-01-18 21:50:48 |
| massgenotyping |
0.2.2 |
Python package for microsatellite genotyping from amplicon sequencing data |
2024-01-12 03:39:47 |
| strnaming |
1.2.0 |
STRNaming STR Sequence Nomenclature |
2024-01-11 17:15:30 |
| sequana-fastqc |
1.8.1 |
A multi-sample fastqc pipeline from Sequana project |
2023-12-29 13:53:51 |
| sequana-bioconvert |
1.1.0 |
description: convert NGS format from one to another using bioconvert |
2023-12-18 08:51:03 |
| sequana-depletion |
0.3.0 |
A pipeline to deplete reads from a given reference |
2023-12-17 09:17:42 |