SCMeTA

Name	SCMeTA JSON
Version	0.2.6 JSON
	download
home_page	https://www.sc-meta.org/
Summary	A python package for single-cell metabolism analysis.
upload_time	2024-02-26 08:24:31
maintainer
docs_url	None
author	EstrellaXD
requires_python	>=3.9,<3.13
license	GPL-3.0-or-later
keywords	single-cell metabolism analysis
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            # SCMeTA

SCMeTA is a python library of single-cell meta-analysis tools. It provides a set of functions for single-cell meta-analysis, including data integration, batch effect correction, cell type annotation, cell clustering, cell trajectory inference, and cell type marker identification. It also provides a set of functions for single-cell data visualization, including dimension reduction, cell clustering, cell trajectory inference, and cell type marker identification. 

## Installation

SCMeTA is available on PyPI and can be installed with pip:

```bash
pip install scmeta
```

## Usage

### Data integration

```python

from SCMeTA import Process

sc = Process()

# Load data

sc.load("data/example.RAW")

# Data process

sc.pre_process()
sc.process()
sc.post_process()

```

## Documentation

The official documentation is hosted on Read the Docs: https://sc-meta.com/

## License

SCMeTA is licensed under the GPLv3 license. See the LICENSE file for more details.



            

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