genome_info

Name	genome_info JSON
Version	1.0.7 JSON
	download
home_page	https://github.com/kylessmith/genome_info
Summary	Python package genome annotations
upload_time	2024-11-20 22:30:52
maintainer	Kyle S. Smith
docs_url	None
author	Kyle S. Smith
requires_python	>=3.10
license	GPL-2.0-or-later
keywords	cython annotation genome
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            # genome_info_

[![Build Status](https://travis-ci.org/kylessmith/genome_info.svg?branch=master)](https://travis-ci.org/kylessmith/genome_info) [![PyPI version](https://badge.fury.io/py/genome_info.svg)](https://badge.fury.io/py/genome_info)
[![Coffee](https://img.shields.io/badge/-buy_me_a%C2%A0coffee-gray?logo=buy-me-a-coffee&color=ff69b4)](https://www.buymeacoffee.com/kylessmith)

A package to work with genomic intervals.


## Install

If you dont already have numpy and scipy installed, it is best to download
`Anaconda`, a python distribution that has them included.  
```
    https://continuum.io/downloads
```

Dependencies can be installed by:

```
    pip install -r requirements.txt
```

PyPI install, presuming you have all its requirements installed:
```
    pip install genome_info(not yet!!)
```

## Usage

```python
import genome_info_
genome = genome_info.GenomeInfo("hg38")
genome.chrom_sizes

genome.n_bases

genome.tss()

genome.tss(upstream=1000, downstream=1000)

```


            

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