mbf-bam


Namembf-bam JSON
Version 0.3.0 PyPI version JSON
download
home_pageNone
SummaryHelpers to deal with BAM files
upload_time2024-01-04 10:06:16
maintainerNone
docs_urlNone
authorFlorian Finkernagel <finkernagel@imt.uni-marburg.de>
requires_python
licenseMIT
keywords bam high troughput sequencing
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # mbf_bam

Fast, multi-core read counters and the like based on the BAM fileformat and rust-htslib.


Part of the mbf_* suite from https://github.com/IMTMarburg

build wheels using
'docker run --rm -v $(pwd):/io ghcr.io/pyo3/maturin build --release -f'
then 'twine upload target/wheels/*'


To use in nix, a flake that provides a function taking
nixpkgs, mach-nix and the version to report to nix is
provided.


            

Raw data

            {
    "_id": null,
    "home_page": null,
    "name": "mbf-bam",
    "maintainer": null,
    "docs_url": null,
    "requires_python": "",
    "maintainer_email": null,
    "keywords": "bam,high troughput sequencing",
    "author": "Florian Finkernagel <finkernagel@imt.uni-marburg.de>",
    "author_email": "Florian Finkernagel <finkernagel@imt.uni-marburg.de>",
    "download_url": null,
    "platform": null,
    "description": "# mbf_bam\n\nFast, multi-core read counters and the like based on the BAM fileformat and rust-htslib.\n\n\nPart of the mbf_* suite from https://github.com/IMTMarburg\n\nbuild wheels using\n'docker run --rm -v $(pwd):/io ghcr.io/pyo3/maturin build --release -f'\nthen 'twine upload target/wheels/*'\n\n\nTo use in nix, a flake that provides a function taking\nnixpkgs, mach-nix and the version to report to nix is\nprovided.\n\n",
    "bugtrack_url": null,
    "license": "MIT",
    "summary": "Helpers to deal with BAM files",
    "version": "0.3.0",
    "project_urls": {
        "Source Code": "https://github.com/TyberiusPrime/mbf_bam"
    },
    "split_keywords": [
        "bam",
        "high troughput sequencing"
    ],
    "urls": [
        {
            "comment_text": null,
            "digests": {
                "blake2b_256": "3a3974b5c33a9ba2a0a5f0b03256e8aa8e585864fe2fc1342174fc588ede603e",
                "md5": "c748f1ec820a7a0a9fcad870060bb602",
                "sha256": "00e35981301696667fa9c7d61d0c630bbb4b87c17ded6e331d58c4ea1353ff6b"
            },
            "downloads": -1,
            "filename": "mbf_bam-0.3.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl",
            "has_sig": false,
            "md5_digest": "c748f1ec820a7a0a9fcad870060bb602",
            "packagetype": "bdist_wheel",
            "python_version": "cp37",
            "requires_python": null,
            "size": 3116111,
            "upload_time": "2024-01-04T10:06:16",
            "upload_time_iso_8601": "2024-01-04T10:06:16.354873Z",
            "url": "https://files.pythonhosted.org/packages/3a/39/74b5c33a9ba2a0a5f0b03256e8aa8e585864fe2fc1342174fc588ede603e/mbf_bam-0.3.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2024-01-04 10:06:16",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "github_user": "TyberiusPrime",
    "github_project": "mbf_bam",
    "github_not_found": true,
    "lcname": "mbf-bam"
}
        
Elapsed time: 0.25419s