# napari-micromanager
[](https://github.com/napari/napari-micromanager/raw/master/LICENSE)
[](https://pypi.org/project/napari-micromanager)
[](https://python.org)
[](https://github.com/pymmcore-plus/napari-micromanager/actions/workflows/test.yml)
[](https://codecov.io/gh/pymmcore-plus/napari-micromanager)
GUI interface between napari and micromanager powered by [pymmcore-plus](https://pymmcore-plus.github.io/pymmcore-plus/) and [pymmcore-widgets](https://pymmcore-plus.github.io/pymmcore-widgets/)
🚧 Experimental! Work in progress! Here be 🐲 🚧
----------------------------------
<img width="1797" alt="mm" src="https://user-images.githubusercontent.com/1609449/138457506-787b7bec-7f30-4d92-b5cf-6e218c87225a.png">
## Installation
You can install `napari-micromanager` via [pip]:
pip install napari-micromanager
You will also need a Qt backend such as PySide2/6, or PyQt5/6. If you've previously installed napari
into this environment with `pip install napari[all]`, then you will likely already have it. If not,
you will also need to install a Qt backend of your choice:
pip install pyqt5 # or any of {pyqt5, pyqt6, pyside2, pyside6}
### Getting micromanager adapters:
The easiest way to get the micromanager adapters is to use:
```
mmcore install
```
this will install micromanager to the pymmcore_plus folder in your site-package; use this to see where:
```
python -c "from pymmcore_plus import find_micromanager; print(find_micromanager())"
```
alternatively, you can direct pymmcore_plus to your own micromanager installation with the `MICROMANAGER_PATH`
environment variable:
```
export MICROMANAGER_PATH='/path/to/Micro-Manager-...'
```
## Contributing
Contributions are very welcome.
### Launching napari with plugin
You can launch napari and automatically load this plugin using the `launch-dev.py` script:
```bash
python launch-dev.py
```
Alternatively you can run:
```bash
napari -w napari-micromanager
```
## License
Distributed under the terms of the [BSD-3] license,
"napari-micromanager" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[file an issue]: https://github.com/pymmcore-plus/napari-micromanager/issues
[napari]: https://github.com/napari/napari
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/
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