| Name | Version | Summary | date |
| scripro |
1.1.30 |
Single-cell gene regulation network inference by large-scale data integration Pro |
2024-06-05 16:54:40 |
| snapatac2 |
2.6.4 |
SnapATAC2: Single-cell epigenomics analysis pipeline |
2024-05-28 02:34:07 |
| scDiffusion |
0.1 |
scDiffusion(Single-Cell graph neural Diffusion) is a physics-informed graph generative model to do scRNA-seq analysis. scDiffusion investigates cellular dynamics utilizing an attention-based neural network. |
2024-05-15 02:41:18 |
| dogma-data |
0.2.12 |
Data processing for Dogma |
2024-04-24 00:16:28 |
| cellrank |
2.0.4 |
CellRank: dynamics from multi-view single-cell data |
2024-04-08 14:22:09 |
| demuxEM |
0.1.7.post1 |
demuxEM is the demultiplexing module of Pegasus |
2024-03-15 19:36:19 |
| moscot |
0.3.4 |
Multi-omic single-cell optimal transport tools |
2024-03-13 10:41:17 |
| mitea-hires |
0.0.18 |
Infer single-cell and spatial microRNA activity from transcriptomics data |
2024-02-27 16:30:16 |
| SCMeTA |
0.2.6 |
A python package for single-cell metabolism analysis. |
2024-02-26 08:24:31 |
| uce-model |
0.1.4 |
Universal Cell Embedding model for single-cell RNA-seq data |
2024-02-19 22:59:36 |
| cellsnake |
0.2.0.12 |
cellsnake |
2024-02-18 12:07:06 |
| scmail |
1.0.9 |
sc-MAIL: single-cell Maximum-likelihood Ancestral Inference for Lineage-tracing |
2024-01-31 19:29:25 |
| cg-gnn |
0.3.2 |
Train a graph neural network on cell graphs. |
2024-01-18 22:38:40 |
| harmony-pytorch |
0.1.8 |
Pytorch implementation of Harmony algorithm on single-cell sequencing data integration |
2024-01-07 21:36:56 |
| oggmap |
0.0.1 |
extract orthologous maps (short: orthomap) from OrthoFinder output for query species |
2023-10-30 16:52:49 |
| pysili |
0.0.3 |
Basic utlilitis for scRNA |
2023-10-08 22:36:31 |
| CellCover |
0.1.9 |
CellCover |
2023-08-17 20:30:34 |
| Epiverse |
0.0.1 |
EpiVerse: A single pipeline for exploring the entire epigenomics universe |
2023-08-04 02:00:22 |
| voyagerpy |
0.1.1 |
Python library for Voyager, the geo-spatialist R library. |
2023-07-26 10:52:10 |
| scce |
0.1.2 |
a Single-cell method for predicting Chromatin Conformation based on gene Expression |
2023-07-24 09:48:41 |