goapfp


Namegoapfp JSON
Version 0.0.dev8 PyPI version JSON
download
home_page
SummaryUtility tools to work with the Gene Ontology in Python
upload_time2023-11-06 22:05:59
maintainer
docs_urlNone
author
requires_python>=3.8
license
keywords gene ontology bioinformatics protein function prediction
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # golib
[![Maintainability](https://api.codeclimate.com/v1/badges/7f998988113c7ae5ff28/maintainability)](https://codeclimate.com/github/alfonsoeromero/golib/maintainability)
[![Test Coverage](https://api.codeclimate.com/v1/badges/7f998988113c7ae5ff28/test_coverage)](https://codeclimate.com/github/alfonsoeromero/golib/test_coverage)

A library to work with the Gene Ontology

## Functionality
In summary:
- Parse a Gene Ontology (see: http://geneontology.org) file and allow queries over it.
- Read Gene Ontology Annotation files in different formats.
- Do up-propagation of an annotation or a seed (i.e. following the true-path rule).
- Certain useful I/O operations

            

Raw data

            {
    "_id": null,
    "home_page": "",
    "name": "goapfp",
    "maintainer": "",
    "docs_url": null,
    "requires_python": ">=3.8",
    "maintainer_email": "",
    "keywords": "Gene Ontology,bioinformatics,protein function prediction",
    "author": "",
    "author_email": "\"Alfonso E. Romero\" <alfonsoeromero@gmail.com>, Mateo Torres <torresmateo@gmail.com>",
    "download_url": "https://files.pythonhosted.org/packages/57/67/d8b9c09e5210de1674d9c7746ad9c098127db622d0f253fa1690f899f079/goapfp-0.0.dev8.tar.gz",
    "platform": null,
    "description": "# golib\n[![Maintainability](https://api.codeclimate.com/v1/badges/7f998988113c7ae5ff28/maintainability)](https://codeclimate.com/github/alfonsoeromero/golib/maintainability)\n[![Test Coverage](https://api.codeclimate.com/v1/badges/7f998988113c7ae5ff28/test_coverage)](https://codeclimate.com/github/alfonsoeromero/golib/test_coverage)\n\nA library to work with the Gene Ontology\n\n## Functionality\nIn summary:\n- Parse a Gene Ontology (see: http://geneontology.org) file and allow queries over it.\n- Read Gene Ontology Annotation files in different formats.\n- Do up-propagation of an annotation or a seed (i.e. following the true-path rule).\n- Certain useful I/O operations\n",
    "bugtrack_url": null,
    "license": "",
    "summary": "Utility tools to work with the Gene Ontology in Python",
    "version": "0.0.dev8",
    "project_urls": {
        "Repository": "https://github.com/torresmateo/golib/tree/development"
    },
    "split_keywords": [
        "gene ontology",
        "bioinformatics",
        "protein function prediction"
    ],
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "e1285f50a9eb02d9834a104189d348a2c95803640c8b009c6d259f01ac6dea19",
                "md5": "b2c46253d2155018de0da3df6a05fb42",
                "sha256": "d66f86e62b5cdd53661b8dc46ff1aa4235b3056522b904a0cd0029f6d78b7e0f"
            },
            "downloads": -1,
            "filename": "goapfp-0.0.dev8-py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "b2c46253d2155018de0da3df6a05fb42",
            "packagetype": "bdist_wheel",
            "python_version": "py3",
            "requires_python": ">=3.8",
            "size": 18334,
            "upload_time": "2023-11-06T22:05:57",
            "upload_time_iso_8601": "2023-11-06T22:05:57.209377Z",
            "url": "https://files.pythonhosted.org/packages/e1/28/5f50a9eb02d9834a104189d348a2c95803640c8b009c6d259f01ac6dea19/goapfp-0.0.dev8-py3-none-any.whl",
            "yanked": false,
            "yanked_reason": null
        },
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "5767d8b9c09e5210de1674d9c7746ad9c098127db622d0f253fa1690f899f079",
                "md5": "2fc998889dc9d6c4f775979e6b9fe7e5",
                "sha256": "c15c1ae377ac306bf76cb4b58117ca00fb14851433572f0029b9b891ee9011c0"
            },
            "downloads": -1,
            "filename": "goapfp-0.0.dev8.tar.gz",
            "has_sig": false,
            "md5_digest": "2fc998889dc9d6c4f775979e6b9fe7e5",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": ">=3.8",
            "size": 14103,
            "upload_time": "2023-11-06T22:05:59",
            "upload_time_iso_8601": "2023-11-06T22:05:59.950358Z",
            "url": "https://files.pythonhosted.org/packages/57/67/d8b9c09e5210de1674d9c7746ad9c098127db622d0f253fa1690f899f079/goapfp-0.0.dev8.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2023-11-06 22:05:59",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "github_user": "torresmateo",
    "github_project": "golib",
    "travis_ci": false,
    "coveralls": false,
    "github_actions": false,
    "lcname": "goapfp"
}
        
Elapsed time: 0.13851s