PyDigger - unearthing stuff about Python


NameVersionSummarydate
aaanalysis 1.0.0 Python framework for interpretable protein prediction 2024-07-01 22:37:21
pysegul 0.4.1 Python bindings for the SEGUL high-performance and memory-efficient phylogenomic tools. 2024-06-28 03:44:21
cpiextract 0.1.3 CPIExtract is a software package to collect and harmonize small molecule and protein interactions. 2024-06-21 13:17:59
bioframe 0.7.2 Operations and utilities for Genomic Interval Dataframes. 2024-06-19 22:03:44
pypcrtool 1.1.1 A Python package for In silico PCR and primer verification. 2024-06-12 10:34:26
probe-design 0.2.45 Probe design for FISH by Quentin Verron 2024-06-04 14:51:54
ncbi-counts 0.2.0 Download the NCBI-generated RNA-seq count data by specifying the Series accession number(s), and the regular expression of the Sample attributes. 2024-06-04 10:34:45
airr 1.5.1 AIRR Community Data Representation Standard reference library for antibody and TCR sequencing data. 2024-06-02 23:23:30
pgc-finder 0.0.4 Python package for probe-based gene cluster finding in large microbial genome database 2024-05-30 05:04:37
breedgym 0.0.2a0 Suite of Gymnasium environments for optimizing breeding programs 2024-05-26 18:11:18
fastqwiper 2024.1.93 An ensemble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and fix reads interleaving 2024-05-26 07:23:00
amulety 1.0 Python package to create embeddings of BCR amino acid sequences. 2024-05-24 18:48:10
affine-gaps 0.2.0 Numba-accelerated Python implementation of affine gap penalty extensions for Needleman-Wunsch and Smith-Waterman algorithms 2024-05-24 07:54:05
blasttools 0.1.16 Commands for turning blast queries into pandas dataframes. 2024-05-14 10:29:32
treetop 2024.5.13.dev1 TreeTOP 2024-05-13 02:35:42
genepattern-notebook 24.4 GenePattern Notebook extension for JupyterLab 2024-04-30 16:28:59
neuron-morphology 1.2.2 Tools for working with single-neuron morphological reconstructions 2024-04-29 22:20:42
ahab-lib 1.0.1 Python CLI library for interacting with ahab cloud API and Kubernetes systems. 2024-04-29 21:45:11
SATO 0.1.7 Python package that generates consensus sequence from the forward and reverse sequences, performs multiple sequence alignment of the fasta sequences, and generates phylogenetic trees using Bayesian and Maximum Likelihood Methods 2024-04-29 18:51:32
PDBViewer 0.1.2 Automatically retrieve a PDB file for a given RCSB PDB id and visualize its 3D structure. 2024-04-28 20:41:51
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