| Name | Version | Summary | date |
| bed-reader |
1.0.4 |
Read and write the PLINK BED format, simply and efficiently. |
2024-04-26 01:54:28 |
| bactopia |
1.1.0 |
A Python package for working with Bactopia |
2024-04-25 18:35:55 |
| pyhmmer |
0.10.12 |
Cython bindings and Python interface to HMMER3. |
2024-04-25 17:30:59 |
| genomeuploader |
2.0.0 |
Python script to upload bins and MAGs in fasta format to ENA (European Nucleotide Archive). This script generates xmls and manifests necessary for submission with webin-cli. |
2024-04-25 16:24:14 |
| biobb-pytorch |
4.1.0 |
biobb_pytorch is the Biobb module collection to create and train ML & DL models. |
2024-04-25 12:42:32 |
| kaptive |
3.0.0b1 |
In silico serotyping |
2024-04-25 07:51:15 |
| camlhmp |
0.0.1 |
Classification through yAML Heuristic Mapping Protocol |
2024-04-25 04:34:34 |
| pronto |
2.5.7 |
Python frontend to ontologies. |
2024-04-24 13:39:46 |
| TreeSAK |
1.31.18 |
BioSAK |
2024-04-24 07:19:12 |
| cpg-workflows |
1.22.13 |
CPG workflows for Hail Batch |
2024-04-24 05:23:33 |
| metamist |
6.9.1 |
Python API for interacting with the Sample API system |
2024-04-24 00:47:30 |
| cutseq |
0.0.24 |
Automatically cut adapter / barcode / UMI from NGS data |
2024-04-23 22:42:29 |
| carabiner-tools |
0.0.2 |
Useful utilities. |
2024-04-23 08:52:32 |
| cpg-utils |
5.0.7 |
Library of convenience functions specific to the CPG |
2024-04-19 03:50:56 |
| bedspec |
0.2.0 |
An HTS-specs compliant BED toolkit. |
2024-04-19 02:05:53 |
| palamedes |
0.0.5 |
Palamedes: HGVS variants from a sequence alignment |
2024-04-18 18:29:20 |
| pyjess |
0.1.1 |
Cython bindings and Python interface to JESS, a 3D template matching software. |
2024-04-18 16:24:13 |
| chewBBACA |
3.3.5 |
A complete suite for gene-by-gene schema creation and strain identification. |
2024-04-18 09:36:26 |
| BioSAK |
1.85.0 |
BioSAK |
2024-04-17 07:17:08 |
| multiqc-sgr |
1.21.3 |
Create aggregate bioinformatics analysis reports across many samples and tools |
2024-04-17 05:51:16 |