| Name | Version | Summary | date |
| pioreactor |
25.8.14 |
The core Python app of the Pioreactor. Control your bioreactor through Python. |
2025-08-15 00:40:19 |
| friend-or-foe |
1.0.1 |
A collection of microbial datasets obtained from metabolic modeling for machine learning research |
2025-08-11 12:42:55 |
| sphae |
1.4.6 |
Assembling pure culture phages from both Illumina and Nanopore sequencing technology |
2025-02-12 08:16:12 |
| humann |
3.9 |
HUMAnN: The HMP Unified Metabolic Analysis Network, version 3 |
2024-02-21 19:49:06 |
| bacdive |
1.0.0 |
BacDive-API - Programmatic Access to the BacDive Database |
2024-01-25 06:34:58 |
| commscores |
0.0.10 |
A Python package for quantifying microbial interactions |
2023-08-23 05:52:46 |
| micrompn |
1.0.1 |
MicroMPN: Software to estimate Most Probable Number (MPN) bacterial abundance from microplates. |
2023-06-12 15:41:20 |
| biobakery-workflows |
3.1 |
bioBakery workflows: A collection of meta'omic analysis workflows |
2022-09-27 13:40:33 |