| Name | Version | Summary | date |
| psm-utils |
0.8.3 |
Common utilities for parsing and handling peptide-spectrum matches and search engine results. |
2024-04-16 20:29:55 |
| im2deep |
0.1.5 |
Framework for prediction of collisional cross-section of peptides. |
2024-04-14 09:55:36 |
| quantmsio |
0.0.3 |
Convert multiple files into quantms.io format |
2024-04-14 07:20:59 |
| multiplierz |
2.2.2 |
The MultiplierZ proteomics package |
2024-04-13 01:19:59 |
| xi-mzidentml-converter |
0.1.23 |
xi-mzidentml-converter uses pyteomics (https://pyteomics.readthedocs.io/en/latest/index.html) to parse mzIdentML files (v1.2.0) and extract crosslink information. Results are written to a relational database (PostgreSQL or SQLite) using sqlalchemy. |
2024-04-08 12:25:52 |
| sdrf-pipelines |
0.0.26 |
Translate, convert SDRF to configuration pipelines |
2024-04-06 07:21:51 |
| AMPcombi |
0.2.2 |
A parsing tool for AMP tools. |
2024-03-21 11:05:38 |
| pixelgen-pixelator |
0.16.2 |
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays. |
2024-03-19 12:35:30 |
| ms2pip |
3.13.0 |
MS²PIP: MS² Peak Intensity Prediction |
2024-03-05 16:39:36 |
| cptac |
1.5.13 |
Python packaging for CPTAC data |
2024-03-04 16:11:34 |
| pmultiqc |
0.0.24 |
Python package for quality control of proteomics datasets, based on multiqc package |
2024-02-25 22:11:51 |
| omicscope |
1.3.13 |
OmicScope: from quantitative proteomics to systems biology. |
2024-02-23 14:19:58 |
| proteobench |
0.2.2b0 |
ProteoBench |
2024-02-16 13:50:12 |
| profasta |
0.0.4 |
A Python library for working with protein containing FASTA files. |
2024-02-16 12:18:34 |
| picked-group-fdr |
0.6.6 |
Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments |
2024-02-09 16:21:22 |
| CPred |
0.0.10 |
CPred: A deep learning framework for predicting the charge state distribution in modified and unmodified peptides in ESI |
2024-02-05 14:38:14 |
| protmapper |
0.0.29 |
Map protein sites to human reference sequence. |
2024-01-19 04:49:14 |
| pydiaid |
0.0.23 |
An open-source Python package of the AlphaPept ecosystem |
2024-01-10 13:53:46 |
| triqler |
0.7.3 |
Triqler: TRansparent Identification-Quantification-Linked Error Rates |
2024-01-04 10:51:19 |
| msstitch |
3.14 |
MS proteomics post processing utilities |
2023-09-04 10:12:05 |