| Name | Version | Summary | date |
| snakemake-storage-plugin-zenodo |
0.1.4 |
A Snakemake storage plugin for reading from and writing to zenodo.org |
2024-06-24 04:21:01 |
| snakemake-storage-plugin-deeporigin |
0.0.2 |
A Snakemake storage plugin for S3 API storage (AWS S3, MinIO, etc.) |
2024-06-03 16:57:18 |
| snakemake-executor-plugin-lsf |
0.2.6 |
A Snakemake executor plugin for submitting jobs to a LSF cluster. |
2024-06-03 14:47:21 |
| snakemake-storage-plugin-sharepoint |
0.4.0 |
Snakemake storage plugin for reading and writing files on Microsoft SharePoint. |
2024-05-21 19:45:29 |
| snakemake-executor-plugin-slurm-jobstep |
0.2.0 |
A Snakemake executor plugin for running srun jobs inside of SLURM jobs (meant for internal use by snakemake-executor-plugin-slurm) |
2024-04-11 14:21:52 |
| pytest-workflow |
2.1.0 |
A pytest plugin for configuring workflow/pipeline tests using YAML files |
2024-03-18 16:02:44 |
| bacpage |
2024.3.8 |
An easy-to-use pipeline for the assembly and analysis of bacterial genomes |
2024-03-11 12:53:35 |
| snakemake-executor-plugin-cluster-generic |
1.0.8 |
|
2024-03-04 14:51:38 |
| culebrONT |
3.0.0 |
CulebrONT is an open-source, scalable, modular and traceable Snakemake pipeline, able to launch multiple |
2024-02-02 10:25:15 |
| snakecdysis |
1.0.0 |
You want to wrap your best snakemake workflow to be easy install and run, Snakecdysis is for you !!!!! Tha aim of Snakecdysis is to easy-wrapped snakemake workflow as python package and then build sub-commands to manage this. !!!!! |
2024-02-02 09:53:44 |
| sequana-variant-calling |
1.2.0 |
A multi-sample variant calling pipeline |
2024-01-31 08:46:23 |
| snakemake-executor-plugin-flux |
0.1.0 |
A snakemake executor plugin for the Flux scheduler |
2024-01-11 07:26:56 |
| sequana-bioconvert |
1.1.0 |
description: convert NGS format from one to another using bioconvert |
2023-12-18 08:51:03 |
| sequana-depletion |
0.3.0 |
A pipeline to deplete reads from a given reference |
2023-12-17 09:17:42 |
| snakemake-executor-plugin-tes |
0.1.2 |
A Snakemake executor plugin for submitting jobs via GA4GH TES. |
2023-12-08 21:48:31 |
| snakemake-storage-plugin-http |
0.2.3 |
Snakemake storage plugin for donwloading input files from HTTP(s). |
2023-12-08 15:51:14 |
| snakemake-storage-plugin-sftp |
0.1.2 |
A Snakemake storage plugin that handles files on an SFTP server. |
2023-12-08 15:50:24 |
| sequana-ribofinder |
1.1.1 |
A multi-sample identification of ribosomal content |
2023-12-05 09:50:57 |
| sequana-multitax |
0.12.1 |
A multi-sample and multi-databases taxonomic analysis using Kraken |
2023-12-04 23:52:30 |
| sequana-nanomerge |
1.5.0 |
Merge barcoded or non barcoded fastq files generated by Nanopore runs |
2023-12-03 21:04:18 |