CodeEntropy


NameCodeEntropy JSON
Version 1.0.0 PyPI version JSON
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home_pageNone
SummaryCodeEntropy tool with POSEIDON code integrated to form a complete and generally applicable set of tools for computing entropy of macromolecular systems from the forces sampled in a MD simulation.
upload_time2025-08-22 19:46:51
maintainerNone
docs_urlNone
authorNone
requires_python>=3.11
licenseNone
keywords entropy macromolecular systems md simulation
VCS
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requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            [//]: # (Badges)
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CodeEntropy
==============================
CodeEntropy is a Python package for computing the configurational entropy of macromolecular systems using forces sampled from molecular dynamics (MD) simulations. It implements the multiscale cell correlation method to provide accurate and efficient entropy estimates, supporting a wide range of applications in molecular simulation and statistical mechanics.

<p align="center">
<img src="https://github.com/CCPBioSim/branding/blob/fbf562b1f5a9bf34440d0a537548591bad0bd206/logos/biosim-codeentropy_logo_grey.png" alt="CodeEntropy logo" width="300"/>
</p>

See [CodeEntropy’s documentation](https://codeentropy.readthedocs.io/en/latest/) for more information.

## Copyright

Copyright (c) 2025 CCPBioSim


## Acknowledgements
 
Project based on 

- [arghya90/CodeEntropy](https://github.com/arghya90/CodeEntropy) version 0.3
- [jkalayan/PoseidonBeta](https://github.com/jkalayan/PoseidonBeta)

            

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    "author_email": "Arghya 'Argo' Chakravorty <arghyac@umich.edu>, Jas Kalayan <jas.kalayan@stfc.ac.uk>, Donald Chung-HK <donald.chung@stfc.ac.uk>, Sarah Fegan <sarah.fegan@stfc.ac.uk>, Ioana Papa <iapapa1@SHEFFIELD.AC.UK>, Harry Swift <harry.swift@stfc.ac.uk>",
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