RSeQC


NameRSeQC JSON
Version 5.0.4 PyPI version JSON
download
home_pageNone
SummaryQC package for RNA-seq data.
upload_time2024-10-03 17:56:04
maintainerNone
docs_urlhttps://pythonhosted.org/RSeQC/
authorNone
requires_python>=3.5
license{{ RSeQC }} Copyright (C) {{ 2024 }} {{ Mayo Clinic }} This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.
keywords rna-seq qc
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # Install RSeQC using [pip](https://pip.pypa.io/en/stable/)

### Check if [pip](https://pip.pypa.io/en/stable/) is available

`pip` is a package manager that allows users to install and manage Python packages. It comes with Python 3.4 and later versions.
 
 `pip --version`
 
 `pip 24.2 from /XXX/YYY/lib/python3.11/site-packages/pip (python 3.11)`

 If you see any errors, following this [instructions](https://pypi.org/project/pip/) to install `pip`.

### (Optional) Create Virtual Environments (Note: `venv` is available in Python 3.3 and later. You can also use [virtualenv](https://packaging.python.org/en/latest/key_projects/#virtualenv))

 `$ python3 -m venv my_env` (will create a directory called my_env)

 `$ source my_env/bin/activate`

### Install

 `$ pip install rseqc`

### Upgrade

 `$ pip install rseqc --upgrade`

### Uninstall

 `pip -y uninstall rseqc`

# Documentation

http://rseqc.sourceforge.net/

            

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