Name | VisualQC JSON |
Version |
0.6.5
JSON |
| download |
home_page | None |
Summary | Assistive tool for the quality control of neuroimaging data |
upload_time | 2023-03-29 22:25:01 |
maintainer | None |
docs_url | None |
author | None |
requires_python | >=3.7 |
license | None |
keywords |
visualqc
|
VCS |
|
bugtrack_url |
|
requirements |
No requirements were recorded.
|
Travis-CI |
No Travis.
|
coveralls test coverage |
No coveralls.
|
.. image:: https://img.shields.io/pypi/v/visualqc.svg
:target: https://pypi.python.org/pypi/visualqc
.. image:: https://app.codacy.com/project/badge/Grade/c67fbfc899d04f5aacd7a0070aeb704d
:target: https://www.codacy.com/gh/raamana/visualqc/dashboard?utm_source=github.com&utm_medium=referral&utm_content=raamana/visualqc&utm_campaign=Badge_Grade
.. image:: https://img.shields.io/badge/say-thanks-ff69b4.svg
:target: https://saythanks.io/to/raamana
==========================================================================================
VisualQC : software development kit for medical and neuroimaging quality control
==========================================================================================
.. image:: docs/vqc_logo_small.png
.. image:: docs/visualqc_poster_comprehensive.png
Links
-------
* Software Documentation: https://raamana.github.io/visualqc
* `User Manual </docs/VisualQC_TrainingManual_v1p4.pdf>`_
* Free software: Apache 2.0 license
* Pure python package (no licensing issues ala matlab, easy to install and update requiring no other external installations or maintenance)
* Generic design for API that can be adapted for other domains, imaging or medical or otherwise.
Galleries
----------
* NEW: `Defacing QC <https://raamana.github.io/visualqc/gallery_defacing.html>`_
* `Freesurfer <https://raamana.github.io/visualqc/gallery_freesurfer.html>`_
* `Functional MRI <https://raamana.github.io/visualqc/gallery_functional_mri.html>`_
* `Registration/Alignment quality <https://raamana.github.io/visualqc/gallery_registration_unimodal.html>`_
* `Structural T1w MRI <https://raamana.github.io/visualqc/gallery_t1_mri.html>`_
* `Volumetric Segmentation <https://raamana.github.io/visualqc/gallery_segmentation_volumetric.html>`_
Contributions
--------------
`Contributions are welcome. <CONTRIBUTING.rst>`_
Citation
--------------
If you used ``VisualQC`` in your analyses or projects, whether or not it was reported in the main paper, please consider citing the paper below:
- Pradeep Reddy Raamana (2022), "VisualQC: software development kit for medical and neuroimaging quality control and assurance". OHBM Aperture Neuro journal, DOI: 10.52294/ApertureNeuro.2022.2.DXYR5548
Bibtex:
.. code-block:: tex
@misc{Raamana_2022_VisualQCSoftware,
author = {Pradeep Reddy Raamana},
title = {{VisualQC: software development kit for medical and neuroimaging quality control and assurance}},
month = Aug,
year = 2022,
doi = {10.52294/ApertureNeuro.2022.2.DXYR5548},
url = {https://doi.org/10.5281/zenodo.1211365}
}
More details at `<docs/citation.rst>`_
---
.. image:: https://img.shields.io/badge/say-thanks-ff69b4.svg
:target: https://saythanks.io/to/raamana
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