afids-cnn


Nameafids-cnn JSON
Version 0.2.1 PyPI version JSON
download
home_page
Summary
upload_time2023-10-03 20:40:03
maintainer
docs_urlNone
authorYour Name
requires_python>=3.8,<3.12
license
keywords
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # afids-NN
Utilizing the anatomical fiducals framework to identify other salient brain regions and automatic localization of anatomical fiducials using neural networks


# Processing data for training 

Convert3D

## Anatomical landmark data (AFIDs)

Convert3D:
1) .fcsv -> threshold image -> landmark distance map (could be considered probability map) 
2) distance map used for training 

## Structural T1w imaging 

Convert3D: 
1) brainmask.nii -> 3D patches sampled at x voxels 
2) matching of distance maps and anatomical imaging patches is crucial for proper training 



            

Raw data

            {
    "_id": null,
    "home_page": "",
    "name": "afids-cnn",
    "maintainer": "",
    "docs_url": null,
    "requires_python": ">=3.8,<3.12",
    "maintainer_email": "",
    "keywords": "",
    "author": "Your Name",
    "author_email": "you@example.com",
    "download_url": "https://files.pythonhosted.org/packages/76/d2/437069367b75b84753daca5c509f06ae78b5cac2fe1f90cdf38b5a7dcbf5/afids_cnn-0.2.1.tar.gz",
    "platform": null,
    "description": "# afids-NN\nUtilizing the anatomical fiducals framework to identify other salient brain regions and automatic localization of anatomical fiducials using neural networks\n\n\n# Processing data for training \n\nConvert3D\n\n## Anatomical landmark data (AFIDs)\n\nConvert3D:\n1) .fcsv -> threshold image -> landmark distance map (could be considered probability map) \n2) distance map used for training \n\n## Structural T1w imaging \n\nConvert3D: \n1) brainmask.nii -> 3D patches sampled at x voxels \n2) matching of distance maps and anatomical imaging patches is crucial for proper training \n\n\n",
    "bugtrack_url": null,
    "license": "",
    "summary": "",
    "version": "0.2.1",
    "project_urls": null,
    "split_keywords": [],
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "f554614f0ee3f82ca892fc4431d1bfed5e1175a2cb75ddb54e12bffb89eeea9e",
                "md5": "7660bc856caa5bb7f5e1634aafec9715",
                "sha256": "55434c4203e3950fd3f2069806c17b3e60a36bffdcc3753212858282124cc12d"
            },
            "downloads": -1,
            "filename": "afids_cnn-0.2.1-py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "7660bc856caa5bb7f5e1634aafec9715",
            "packagetype": "bdist_wheel",
            "python_version": "py3",
            "requires_python": ">=3.8,<3.12",
            "size": 13715405,
            "upload_time": "2023-10-03T20:39:59",
            "upload_time_iso_8601": "2023-10-03T20:39:59.836081Z",
            "url": "https://files.pythonhosted.org/packages/f5/54/614f0ee3f82ca892fc4431d1bfed5e1175a2cb75ddb54e12bffb89eeea9e/afids_cnn-0.2.1-py3-none-any.whl",
            "yanked": false,
            "yanked_reason": null
        },
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "76d2437069367b75b84753daca5c509f06ae78b5cac2fe1f90cdf38b5a7dcbf5",
                "md5": "1ec4f734981edeb10426145d3c6b5522",
                "sha256": "44bcf46ff03a22101c52b17d5c056a69edb84696a3cb9b2ba05019448c81a118"
            },
            "downloads": -1,
            "filename": "afids_cnn-0.2.1.tar.gz",
            "has_sig": false,
            "md5_digest": "1ec4f734981edeb10426145d3c6b5522",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": ">=3.8,<3.12",
            "size": 13714358,
            "upload_time": "2023-10-03T20:40:03",
            "upload_time_iso_8601": "2023-10-03T20:40:03.931897Z",
            "url": "https://files.pythonhosted.org/packages/76/d2/437069367b75b84753daca5c509f06ae78b5cac2fe1f90cdf38b5a7dcbf5/afids_cnn-0.2.1.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2023-10-03 20:40:03",
    "github": false,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "lcname": "afids-cnn"
}
        
Elapsed time: 0.37830s