=======
anchors
=======
.. image:: https://img.shields.io/pypi/v/anchors.svg
:target: https://pypi.python.org/pypi/anchors
.. image:: https://img.shields.io/travis/gpp-rnd/anchors.svg
:target: https://travis-ci.com/gpp-rnd/anchors
.. image:: https://readthedocs.org/projects/anchors/badge/?version=latest
:target: https://anchors.readthedocs.io/en/latest/?badge=latest
:alt: Documentation Status
Python package for calculating scores from ancnchor or modifier screens
* Free software: MIT license
* Documentation: https://anchors.readthedocs.io.
Tutorial
--------
To install::
$ pip install anchors
Basic Usage
^^^^^^^^^^^
.. code:: python
import pandas as pd
from anchors import get_guide_residuals, get_gene_residuals
lfc_df = pd.read_csv('https://raw.githubusercontent.com/PeterDeWeirdt/anchor_screen_parp_lfcs/master/parp_example_lfcs.csv')
refernce_condition_df = pd.read_csv('https://raw.githubusercontent.com/PeterDeWeirdt/anchor_screen_parp_lfcs/master/parp_example_mapping.csv')
guide_residuals, model_info, model_fit_plots = get_guide_residuals(lfc_df, refernce_condition_df)
guide_mapping_df = pd.read_csv('https://raw.githubusercontent.com/PeterDeWeirdt/anchor_screen_parp_lfcs/master/brunello_guide_map.csv')
gene_residuals = get_gene_residuals(guide_residuals, guide_mapping_df)
Features
--------
* TODO
Credits
-------
This package was created with Cookiecutter_ and the `audreyr/cookiecutter-pypackage`_ project template.
.. _Cookiecutter: https://github.com/audreyr/cookiecutter
.. _`audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage
=======
History
=======
0.1.0 (2020-09-21)
------------------
* First release on PyPI.
0.3.0 (2020-09-21)
------------------
* Calculate guide and gene residuals.
Raw data
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