[](https://pypi.org/project/bletl)
[](https://github.com/jubiotech/bletl/actions)
[](https://codecov.io/gh/jubiotech/bletl)
[](https://bletl.readthedocs.io/en/latest/?badge=latest)
[](https://doi.org/10.5281/zenodo.5101434)
# Installation
`bletl` is available through [PyPI](https://pypi.org/project/bletl/):
```
pip install bletl
```
## For Developers
You can use `bletl` by installing it in your Python environment.
1. clone it `git clone https://github.com/JuBiotech/bletl`
2. `cd bletl`
3. `pip install -e .` to install it into your (activated!) Python environment in "editable mode"
# Contributing
The easiest way to contribute is to report bugs by opening [Issues](https://github.com/JuBiotech/bletl/issues).
If you want to contribute, you should...
1. Clone `bletl`
2. Create a new branch
3. Make changes on your feature-branch
4. Open a [Pull Request](https://github.com/JuBiotech/bletl/pulls)
# Usage and Citing
`bletl` is licensed under the [GNU Affero General Public License v3.0](https://github.com/JuBiotech/bletl/blob/main/LICENSE.md).
When using `bletl` in your work, please cite the [Osthege & Tenhaef et al. (2022) paper](https://doi.org/10.1002/elsc.202100108) __and__ the [corresponding software version](https://doi.org/10.5281/zenodo.5101434).
Note that the paper is a shared first co-authorship, which can be indicated by <sup>1</sup> in the bibliography.
```bibtex
@article{bletlPaper,
author = {Osthege$^1$, Michael and
Tenhaef$^1$, Niklas and
Zyla, Rebecca and
Müller, Carolin and
Hemmerich, Johannes and
Wiechert, Wolfgang and
Noack, Stephan and
Oldiges, Marco},
title = {bletl - A Python package for integrating {B}io{L}ector microcultivation devices in the {D}esign-{B}uild-{T}est-{L}earn cycle},
journal = {Engineering in Life Sciences},
volume = {22},
number = {3-4},
pages = {242-259},
keywords = {BioLector, feature extraction, growth rate, microbial phenotyping, uncertainty quantification},
doi = {https://doi.org/10.1002/elsc.202100108},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/elsc.202100108},
eprint = {https://onlinelibrary.wiley.com/doi/pdf/10.1002/elsc.202100108},
year = {2022}
}
@software{bletl,
author = {Michael Osthege and
Niklas Tenhaef and
Laura Helleckes and
Carolin Müller},
title = {JuBiotech/bletl: v1.1.0},
month = feb,
year = 2022,
publisher = {Zenodo},
version = {v1.1.0},
doi = {10.5281/zenodo.6284777},
url = {https://doi.org/10.5281/zenodo.6284777}
}
```
Head over to Zenodo to [generate a BibTeX citation](https://doi.org/10.5281/zenodo.5101434) for the latest release.
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