| Name | cpgtools JSON |
| Version |
2.0.3
JSON |
| download |
| home_page | None |
| Summary | Tools to analyze and visualize DNA methylation data |
| upload_time | 2024-11-15 19:37:54 |
| maintainer | None |
| docs_url | None |
| author | None |
| requires_python | >=3.5 |
| license | Copyright (c) 2024 The Python Packaging Authority Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
| keywords |
dna methylation
epic
450k
850k
935k
rrbs
wgbs
|
| VCS |
 |
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
## Install CpGtools using [pip](https://pip.pypa.io/en/stable/)
1. (Optional) Create Virtual Environments (Note: `venv` is available in Python 3.3 and later. You can also use [virtualenv](https://packaging.python.org/en/latest/key_projects/#virtualenv))
`$ python3 -m venv my_env` (will create a directory called my_env)
`$ source my_env/bin/activate`
2. Install CpGtools
`$ pip install cpgtools`
or
`$ pip install git+https://github.com/liguowang/cpgtools.git`
3. Upgrade
`$ pip install cpgtools --upgrade`
4. Uninstall
`pip -y uninstall cpgtools`
## Documentation
https://cpgtools.readthedocs.io/en/latest/
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