emtools


Nameemtools JSON
Version 0.1.3 PyPI version JSON
download
home_pagehttps://github.com/3dem/emtools
SummaryUtilities for CryoEM data manipulation
upload_time2024-11-14 19:45:11
maintainerNone
docs_urlNone
authorJ.M. De la Rosa Trevin, Grigory Sharov
requires_pythonNone
licenseNone
keywords electron-microscopy cryo-em structural-biology image-processing
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            
.. |logo_image| image:: https://github.com/3dem/emhub/wiki/images/emtools-logo.png
   :height: 60px

|logo_image|

**emtools** is a Python package with utilities for manipulating CryoEM images
and metadata such as STAR files or SQLITE databases. It also contains other
miscellaneous utils for processes handling and monitoring, among others.

The library is composed by several modules that provide mainly classes to
perform certain operations.

For more detailed information check the documentation at:

https://3dem.github.io/emdocs/emtools/


Installation
------------

.. code-block:: bash

    pip install emtools

Or for development:

.. code-block:: bash

    git clone git@github.com:3dem/emtools.git
    pip install -e emtools/

Usage
-----

Testing
-------

.. code-block:: bash

    python -m unittest emtools.tests.test_utils
    python -m unittest emtools.tests.test_metadata
    python -m unittest emtools.tests.test_pipeline

How to cite
-----------

Please cite the code repository DOI: xxx

Authors
-------

 * Jose Miguel de la Rosa-TrevĂ­n, St.Jude Children's Research Hospital, Memphis, TN










            

Raw data

            {
    "_id": null,
    "home_page": "https://github.com/3dem/emtools",
    "name": "emtools",
    "maintainer": null,
    "docs_url": null,
    "requires_python": null,
    "maintainer_email": null,
    "keywords": "electron-microscopy cryo-em structural-biology image-processing",
    "author": "J.M. De la Rosa Trevin, Grigory Sharov",
    "author_email": "delarosatrevin@gmail.com, gsharov@mrc-lmb.cam.ac.uk",
    "download_url": "https://files.pythonhosted.org/packages/4c/50/7fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc/emtools-0.1.3.tar.gz",
    "platform": null,
    "description": "\n.. |logo_image| image:: https://github.com/3dem/emhub/wiki/images/emtools-logo.png\n   :height: 60px\n\n|logo_image|\n\n**emtools** is a Python package with utilities for manipulating CryoEM images\nand metadata such as STAR files or SQLITE databases. It also contains other\nmiscellaneous utils for processes handling and monitoring, among others.\n\nThe library is composed by several modules that provide mainly classes to\nperform certain operations.\n\nFor more detailed information check the documentation at:\n\nhttps://3dem.github.io/emdocs/emtools/\n\n\nInstallation\n------------\n\n.. code-block:: bash\n\n    pip install emtools\n\nOr for development:\n\n.. code-block:: bash\n\n    git clone git@github.com:3dem/emtools.git\n    pip install -e emtools/\n\nUsage\n-----\n\nTesting\n-------\n\n.. code-block:: bash\n\n    python -m unittest emtools.tests.test_utils\n    python -m unittest emtools.tests.test_metadata\n    python -m unittest emtools.tests.test_pipeline\n\nHow to cite\n-----------\n\nPlease cite the code repository DOI: xxx\n\nAuthors\n-------\n\n * Jose Miguel de la Rosa-Trev\u00edn, St.Jude Children's Research Hospital, Memphis, TN\n\n\n\n\n\n\n\n\n\n",
    "bugtrack_url": null,
    "license": null,
    "summary": "Utilities for CryoEM data manipulation",
    "version": "0.1.3",
    "project_urls": {
        "Bug Reports": "https://github.com/3dem/emtools/issues",
        "Homepage": "https://github.com/3dem/emtools",
        "Source": "https://github.com/3dem/emtools"
    },
    "split_keywords": [
        "electron-microscopy",
        "cryo-em",
        "structural-biology",
        "image-processing"
    ],
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "fe88eebdbbd75933050114e35cb30cff179db92b29b7ca0ca30203c3203e5d25",
                "md5": "8d423fbbdf67a934f1fd1731c41cd99e",
                "sha256": "2164f3be2119e4f5cac34b175a7c4fc765a7c041c3e1e2e615e564b7a2ced43f"
            },
            "downloads": -1,
            "filename": "emtools-0.1.3-py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "8d423fbbdf67a934f1fd1731c41cd99e",
            "packagetype": "bdist_wheel",
            "python_version": "py3",
            "requires_python": null,
            "size": 103262,
            "upload_time": "2024-11-14T19:45:10",
            "upload_time_iso_8601": "2024-11-14T19:45:10.056011Z",
            "url": "https://files.pythonhosted.org/packages/fe/88/eebdbbd75933050114e35cb30cff179db92b29b7ca0ca30203c3203e5d25/emtools-0.1.3-py3-none-any.whl",
            "yanked": false,
            "yanked_reason": null
        },
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "4c507fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc",
                "md5": "fe63ead3653ae54da433c61b6d9c6421",
                "sha256": "1e7ebdeac4c210637fb6729713432e1c3946c1c46930160495011d78e6091c95"
            },
            "downloads": -1,
            "filename": "emtools-0.1.3.tar.gz",
            "has_sig": false,
            "md5_digest": "fe63ead3653ae54da433c61b6d9c6421",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 68345,
            "upload_time": "2024-11-14T19:45:11",
            "upload_time_iso_8601": "2024-11-14T19:45:11.704959Z",
            "url": "https://files.pythonhosted.org/packages/4c/50/7fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc/emtools-0.1.3.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2024-11-14 19:45:11",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "github_user": "3dem",
    "github_project": "emtools",
    "travis_ci": false,
    "coveralls": false,
    "github_actions": true,
    "requirements": [],
    "lcname": "emtools"
}
        
Elapsed time: 0.39766s