| Name | ftuutils JSON |
| Version |
0.1.3
JSON |
| download |
| home_page | None |
| Summary | Utilities to create FTU graph templates |
| upload_time | 2024-06-14 09:24:11 |
| maintainer | None |
| docs_url | None |
| author | None |
| requires_python | >=3.7 |
| license | MIT License Copyright (c) 2024 Jagirhussan Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
| keywords |
ftu
tissue
cells
port-hamiltonian
bond graphs
12 labours
|
| VCS |
|
| bugtrack_url |
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| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
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| coveralls test coverage |
No coveralls.
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# FTUUtils
A python library to create Functional Tissue Units using celltype models and their interconnection information. Library was developed to support the NZ MBIE 12 Labours project.
### Context
Modelling the human physiology is a complex task. The complexity is not just limited to characterising the physiological processes in a quantifiable framework, but managing the models, connecting them and reusing them to represent the multiscale, spatio-temporal processes. Functional Tissue Units (FTU) provide a concept to modularize physiology, develop models and integrate them in a hierarchical and causally tractable manner.
Futher details regarding FTUs, modelling approach and functionality provided by this library are available in the [TechnicalReport](TechnicalReport.pdf).
A workflow create FTU from given interconnection of cells, their dynamics is available as a [jupyter notebook](tests/ftuworkflow.ipynb).
### Support
Users/Developers can report issues, request enhancements and features through github.
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