| Name | hardyweinberg-equilibrium JSON |
| Version |
0.1.3.post20230611
JSON |
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| home_page | |
| Summary | Hardy-Weinberg Equilibrium Calculator. Calculates the expected genotype frequencies based on the allele frequencies of a population in Hardy-Weinberg equilibrium. |
| upload_time | 2023-06-11 06:47:10 |
| maintainer | info@hyfisolutions.com |
| docs_url | None |
| author | Dellius Alexander |
| requires_python | |
| license | LICENSE |
| keywords |
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| bugtrack_url |
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No requirements were recorded.
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# Hardy Weinberg Equilibrium
Hardy-Weinberg Equilibrium Calculator. Calculates the expected
genotype frequencies based on the allele frequencies of a
population in Hardy-Weinberg equilibrium.
## Usage
```text
usage:
main.py [-h] [--version] [--verbose] [--debug] [--samples SAMPLES] [--p P] [--q Q] [--tpop TPOP] [--ppop PPOP] [--qpop QPOP] [--pq2pop PQ2POP] [--genes GENES [GENES ...]]
Alternate module usage:
python3 -m src.main [-h] [--version] [--verbose] [--debug] [--samples SAMPLES] [--p P] [--q Q] [--tpop TPOP] [--ppop PPOP] [--qpop QPOP] [--pq2pop PQ2POP] [--genes GENES [GENES ...]]
Hardy-Weinberg Equilibrium Calculator. Calculates the expected genotype frequencies based on the allele frequencies of a population in Hardy-Weinberg equilibrium. Alternate module usage: python3 -m src.main --ppop 10 --qpop 10
--pq2pop 200 --verbose See: https://en.wikipedia.org/wiki/Hardy%E2%80%93Weinberg_principle
optional arguments:
-h, --help show this help message and exit
--version show program's version number and exit
--verbose Enable verbose logging. (default: False)
--debug Enable debug logging. (default: False)
--samples SAMPLES Number of samples to generate, if using random data generator. (default: None)
--p P Frequency of dominant allele. (default: None)
--q Q Frequency of recessive allele. (default: None)
--tpop TPOP Total population. (default: None)
--ppop PPOP Original population of dominant allele. (default: None)
--qpop QPOP Original population of recessive allele. (default: None)
--pq2pop PQ2POP Original population of heterozygous allele. (default: None)
--genes GENES [GENES ...]
List of JSON[Genes] to calculate. Note: This is list of json objects representing of Gene class. (default: <lambda>)
Example: python3 -m main.py --ppop 10 --qpop 10 --pq2pop 200 --verbose | Example: python3 -m [package].[module] --samples 1000 --verbose
```
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"description": "# Hardy Weinberg Equilibrium\n\n\nHardy-Weinberg Equilibrium Calculator. Calculates the expected \ngenotype frequencies based on the allele frequencies of a \npopulation in Hardy-Weinberg equilibrium.\n\n## Usage\n\n```text\nusage: \n main.py [-h] [--version] [--verbose] [--debug] [--samples SAMPLES] [--p P] [--q Q] [--tpop TPOP] [--ppop PPOP] [--qpop QPOP] [--pq2pop PQ2POP] [--genes GENES [GENES ...]]\n\nAlternate module usage: \n python3 -m src.main [-h] [--version] [--verbose] [--debug] [--samples SAMPLES] [--p P] [--q Q] [--tpop TPOP] [--ppop PPOP] [--qpop QPOP] [--pq2pop PQ2POP] [--genes GENES [GENES ...]]\n\n\nHardy-Weinberg Equilibrium Calculator. Calculates the expected genotype frequencies based on the allele frequencies of a population in Hardy-Weinberg equilibrium. Alternate module usage: python3 -m src.main --ppop 10 --qpop 10\n--pq2pop 200 --verbose See: https://en.wikipedia.org/wiki/Hardy%E2%80%93Weinberg_principle\n\noptional arguments:\n -h, --help show this help message and exit\n --version show program's version number and exit\n --verbose Enable verbose logging. (default: False)\n --debug Enable debug logging. (default: False)\n --samples SAMPLES Number of samples to generate, if using random data generator. (default: None)\n --p P Frequency of dominant allele. (default: None)\n --q Q Frequency of recessive allele. (default: None)\n --tpop TPOP Total population. (default: None)\n --ppop PPOP Original population of dominant allele. (default: None)\n --qpop QPOP Original population of recessive allele. (default: None)\n --pq2pop PQ2POP Original population of heterozygous allele. (default: None)\n --genes GENES [GENES ...]\n List of JSON[Genes] to calculate. Note: This is list of json objects representing of Gene class. (default: <lambda>)\n\nExample: python3 -m main.py --ppop 10 --qpop 10 --pq2pop 200 --verbose | Example: python3 -m [package].[module] --samples 1000 --verbose\n```\n",
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