kingfisher


Namekingfisher JSON
Version 0.4.1 PyPI version JSON
download
home_pagehttps://github.com/wwood/kingfisher-download
SummaryDownload/extract biological FASTA/Q read data and metadata
upload_time2024-01-17 21:25:34
maintainer
docs_urlNone
authorBen Woodcroft
requires_python
licenseGPL3+
keywords
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            Welcome

Kingfisher is a fast and flexible program for procurement of sequence files (and
their annotations) from public data sources, including the European Nucleotide
Archive (ENA), NCBI SRA, Amazon AWS and Google Cloud. It's input is one or more
"Run" accessions e.g. DRR001970, or a BioProject accessions e.g. PRJNA621514 or
SRP260223.

For more documentation, see https://wwood.github.io/kingfisher-download/

<img src="images/kingfisher_logo.png" alt="Kingfisher logo" width="600"/>

            

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