Name | matrix-schema JSON |
Version |
0.4.0
JSON |
| download |
home_page | None |
Summary | The collected MATRIX schemas |
upload_time | 2025-07-08 23:54:12 |
maintainer | None |
docs_url | None |
author | Nicolas Matentzoglu |
requires_python | >=3.9 |
license | BSD-3 |
keywords |
|
VCS |
|
bugtrack_url |
|
requirements |
No requirements were recorded.
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Travis-CI |
No Travis.
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coveralls test coverage |
No coveralls.
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# matrix-schema
The collected MATRIX schemas
## Website
[https://everycure-org.github.io/matrix-schema](https://everycure-org.github.io/matrix-schema)
## Repository Structure
* [examples/](examples/) - example data
* [project/](project/) - project files (do not edit these)
* [src/](src/) - source files (edit these)
* [matrix_schema](src/matrix_schema)
* [schema](src/matrix_schema/schema) -- LinkML schema
(edit this)
* [valid_biolink_edge_types.tsv](src/matrix_schema/schema/valid_biolink_edge_types.tsv) -- Generated table of valid edge types
* [datamodel](src/matrix_schema/datamodel) -- generated
Python datamodel
* [utils](src/matrix_schema/utils) -- utility scripts for schema generation
* [tests/](tests/) - Python tests
## Developer Documentation
<details>
Use the `make` command to generate project artefacts:
* `make all`: make everything
* `make deploy`: deploys site
* `make gen-valid-edge-type-table`: regenerate the valid Biolink edge types table
</details>
## Release Artifacts
The following artifacts are automatically generated and attached to GitHub releases:
* `valid_biolink_edge_types.tsv` - A table of valid edge types from the Biolink model with columns for `subject_category`, `predicate`, and `object_category`
## Credits
This project was made with
[linkml-project-cookiecutter](https://github.com/linkml/linkml-project-cookiecutter).
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