| Name | md-harmonize JSON |
| Version |
1.0.4
JSON |
| download |
| home_page | |
| Summary | Harmonize compounds and reactions across public metabolic databases. |
| upload_time | 2023-02-04 18:01:23 |
| maintainer | |
| docs_url | None |
| author | |
| requires_python | >=3.7 |
| license | A modified Clear BSD License Copyright (c) 2022, Huan Jin, Hunter N.B. Moseley All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted (subject to the limitations in the disclaimer below) provided that the following conditions are met: * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. * Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. * If the source code is used in a published work, then proper citation of the source code must be included with the published work. NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE GRANTED BY THIS LICENSE. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |
| keywords |
metabolic database
harmonization
|
| VCS |
|
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
md_harmonize
============
.. image:: https://img.shields.io/pypi/v/md_harmonize.svg
:target: https://pypi.org/project/md-harmonize/
:alt: Current library version
.. image:: https://img.shields.io/pypi/pyversions/md_harmonize.svg
:target: https://pypi.org/project/md-harmonize
:alt: Supported Python versions
md_harmonize package provides facilities for creation and harmonization of compounds and reactions.
Citation
~~~~~~~~
Please cite the GitHub repository until our manuscript is accepted for
publication: https://github.com/MoseleyBioinformaticsLab/md_harmonize.git
Installation
~~~~~~~~~~~~
md_harmonize runs under Python 3.7+ and is available through python3-pip.
Install via pip or clone the git repo and install the following dependencies and
you are ready to go!
Install on Linux
~~~~~~~~~~~~~~~~
Pip installation
----------------
.. code:: bash
python3 -m pip install md-harmonize
Note:
Please add ~/.local/bin/ to the environmental PATH variant in bash_profile if you install the package with --user.
python3-devel is required for package installation.
GitHub Package installation
---------------------------
.. code:: bash
git clone git@github.com:MoseleyBioinformaticsLab/md_harmonize.git
License
~~~~~~~
Made available under the terms of The modified Clear BSD License. See full license in LICENSE_.
Authors
~~~~~~~
* **Huan Jin**
* **Hunter N.B. Moseley**
.. _LICENSE: https://github.com/MoseleyBioinformaticsLab/MDH/blob/master/LICENSE
Raw data
{
"_id": null,
"home_page": "",
"name": "md-harmonize",
"maintainer": "",
"docs_url": null,
"requires_python": ">=3.7",
"maintainer_email": "",
"keywords": "metabolic database,harmonization",
"author": "",
"author_email": "",
"download_url": "https://files.pythonhosted.org/packages/a1/45/c0411852b594bceaa4672e764f1fb487d850c23b5235fcf007820f83e9e0/md_harmonize-1.0.4.tar.gz",
"platform": null,
"description": "md_harmonize\n============\n\n.. image:: https://img.shields.io/pypi/v/md_harmonize.svg\n :target: https://pypi.org/project/md-harmonize/\n :alt: Current library version\n\n.. image:: https://img.shields.io/pypi/pyversions/md_harmonize.svg\n :target: https://pypi.org/project/md-harmonize\n :alt: Supported Python versions\n\n\nmd_harmonize package provides facilities for creation and harmonization of compounds and reactions.\n\nCitation\n~~~~~~~~\n\nPlease cite the GitHub repository until our manuscript is accepted for\npublication: https://github.com/MoseleyBioinformaticsLab/md_harmonize.git\n\nInstallation\n~~~~~~~~~~~~\n\nmd_harmonize runs under Python 3.7+ and is available through python3-pip.\nInstall via pip or clone the git repo and install the following dependencies and\nyou are ready to go!\n\nInstall on Linux\n~~~~~~~~~~~~~~~~\n\nPip installation\n----------------\n \n.. code:: bash\n\n python3 -m pip install md-harmonize\n\nNote: \n Please add ~/.local/bin/ to the environmental PATH variant in bash_profile if you install the package with --user.\n \n python3-devel is required for package installation. \n\nGitHub Package installation\n---------------------------\n\n.. code:: bash\n\n git clone git@github.com:MoseleyBioinformaticsLab/md_harmonize.git\n\nLicense\n~~~~~~~\n\nMade available under the terms of The modified Clear BSD License. See full license in LICENSE_.\n\nAuthors\n~~~~~~~\n\n* **Huan Jin**\n* **Hunter N.B. Moseley**\n\n\n.. _LICENSE: https://github.com/MoseleyBioinformaticsLab/MDH/blob/master/LICENSE\n\n",
"bugtrack_url": null,
"license": "A modified Clear BSD License Copyright (c) 2022, Huan Jin, Hunter N.B. Moseley All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted (subject to the limitations in the disclaimer below) provided that the following conditions are met: * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. * Neither the name of the copyright holder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. * If the source code is used in a published work, then proper citation of the source code must be included with the published work. NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE GRANTED BY THIS LICENSE. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.",
"summary": "Harmonize compounds and reactions across public metabolic databases.",
"version": "1.0.4",
"split_keywords": [
"metabolic database",
"harmonization"
],
"urls": [
{
"comment_text": "",
"digests": {
"blake2b_256": "2ef688e63a06bee66f7fa12323457ea9ab50740534e2b06fb78d114802e77628",
"md5": "1a0c2bff308f249a462c54fb3030b6cd",
"sha256": "e127a402981a769b7d89e612284182c27e54752116baf1ae08a1298b04bac0ec"
},
"downloads": -1,
"filename": "md_harmonize-1.0.4-py3-none-any.whl",
"has_sig": false,
"md5_digest": "1a0c2bff308f249a462c54fb3030b6cd",
"packagetype": "bdist_wheel",
"python_version": "py3",
"requires_python": ">=3.7",
"size": 289409,
"upload_time": "2023-02-04T18:01:21",
"upload_time_iso_8601": "2023-02-04T18:01:21.527750Z",
"url": "https://files.pythonhosted.org/packages/2e/f6/88e63a06bee66f7fa12323457ea9ab50740534e2b06fb78d114802e77628/md_harmonize-1.0.4-py3-none-any.whl",
"yanked": false,
"yanked_reason": null
},
{
"comment_text": "",
"digests": {
"blake2b_256": "a145c0411852b594bceaa4672e764f1fb487d850c23b5235fcf007820f83e9e0",
"md5": "587a1bf4ebc68b02e2488a5baf80592e",
"sha256": "0876cb31b4f5e489336d5871843858bcd1cdecfd3ff60de6091898af3fa45d20"
},
"downloads": -1,
"filename": "md_harmonize-1.0.4.tar.gz",
"has_sig": false,
"md5_digest": "587a1bf4ebc68b02e2488a5baf80592e",
"packagetype": "sdist",
"python_version": "source",
"requires_python": ">=3.7",
"size": 56395,
"upload_time": "2023-02-04T18:01:23",
"upload_time_iso_8601": "2023-02-04T18:01:23.695285Z",
"url": "https://files.pythonhosted.org/packages/a1/45/c0411852b594bceaa4672e764f1fb487d850c23b5235fcf007820f83e9e0/md_harmonize-1.0.4.tar.gz",
"yanked": false,
"yanked_reason": null
}
],
"upload_time": "2023-02-04 18:01:23",
"github": false,
"gitlab": false,
"bitbucket": false,
"lcname": "md-harmonize"
}
