| Name | multidms JSON |
| Version |
1.1.0
JSON |
| download |
| home_page | None |
| Summary | Joint modeling of multiple deep mutational scanning experiments. |
| upload_time | 2024-07-12 19:13:19 |
| maintainer | None |
| docs_url | None |
| author | None |
| requires_python | >=3.9 |
| license | MIT License Copyright (c) 2021 Fred Hutchinson Cancer Research Center Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
| keywords |
multidms
generalized lasso
deep
mutational
scanning
dms
bloom
matsen
|
| VCS |
 |
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
# multidms
[](https://badge.fury.io/py/multidms)
[](https://github.com/matsengrp/multidms/actions/workflows/build_test_package.yml)
[](https://github.com/psf/black)
[](https://github.com/astral-sh/ruff)
`multidms` is a Python package written by the
[Matsen group](https://matsen.fhcrc.org/)
in collaboration with
[William DeWitt](https://wsdewitt.github.io/)
and the
[Bloom Lab](https://research.fhcrc.org/bloom/en.html).
It can be used to jointly fit a global-epistasis model to one or more deep mutational scanning experiments,
with the goal of estimating the effects of individual mutations,
and how much the effects differ between experiments.
The source code is [on GitHub](https://github.com/matsengrp/multidms).
Please see the [Documentation](https://matsengrp.github.io/multidms/) for details on installation and usage.
To contribute to this package, read the instructions in [CONTRIBUTING.rst](CONTRIBUTING.rst).
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"description": "# multidms\n\n\n[](https://badge.fury.io/py/multidms)\n[](https://github.com/matsengrp/multidms/actions/workflows/build_test_package.yml)\n[](https://github.com/psf/black)\n[](https://github.com/astral-sh/ruff)\n\n`multidms` is a Python package written by the \n[Matsen group](https://matsen.fhcrc.org/)\nin collaboration with \n[William DeWitt](https://wsdewitt.github.io/)\nand the\n[Bloom Lab](https://research.fhcrc.org/bloom/en.html).\nIt can be used to jointly fit a global-epistasis model to one or more deep mutational scanning experiments, \nwith the goal of estimating the effects of individual mutations, \nand how much the effects differ between experiments.\n\nThe source code is [on GitHub](https://github.com/matsengrp/multidms).\n\nPlease see the [Documentation](https://matsengrp.github.io/multidms/) for details on installation and usage.\n\nTo contribute to this package, read the instructions in [CONTRIBUTING.rst](CONTRIBUTING.rst).\n",
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