# napari-micromanager
[![License](https://img.shields.io/pypi/l/napari-micromanager.svg?color=green)](https://github.com/napari/napari-micromanager/raw/master/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/napari-micromanager.svg?color=green)](https://pypi.org/project/napari-micromanager)
[![Python Version](https://img.shields.io/pypi/pyversions/napari-micromanager.svg?color=green)](https://python.org)
[![Tests](https://github.com/pymmcore-plus/napari-micromanager/actions/workflows/ci.yml/badge.svg)](https://github.com/pymmcore-plus/napari-micromanager/actions/workflows/ci.yml)
[![codecov](https://codecov.io/gh/pymmcore-plus/napari-micromanager/branch/main/graph/badge.svg?token=tf6lYDWV1s)](https://codecov.io/gh/pymmcore-plus/napari-micromanager)
GUI interface between napari and micromanager powered by [pymmcore-plus](https://pymmcore-plus.github.io/pymmcore-plus/) and [pymmcore-widgets](https://pymmcore-plus.github.io/pymmcore-widgets/)
----------------------------------
<img width="1840" alt="napari-micromanager" src="https://github.com/pymmcore-plus/napari-micromanager/assets/1609449/e1f395cd-2d57-488e-89e2-b1923310fc2a">
## Installation
You can install `napari-micromanager` via [pip]:
pip install napari-micromanager
You will also need a Qt backend such as PySide2/6, or PyQt5/6. **PyQt is
preferred and receives more testing**. If you've previously installed napari
into this environment with `pip install napari[all]`, then you will likely
already have it. If not, you will also need to install a Qt backend of your
choice:
pip install pyqt5 # or any of {pyqt5, pyqt6, pyside2, pyside6}
### Getting micromanager adapters
The easiest way to get the micromanager adapters is to use:
```
mmcore install
```
this will install micromanager to the pymmcore_plus folder in your site-package; use this to see where:
```
python -c "from pymmcore_plus import find_micromanager; print(find_micromanager())"
```
alternatively, you can direct pymmcore_plus to your own micromanager installation with the `MICROMANAGER_PATH`
environment variable:
```
export MICROMANAGER_PATH='/path/to/Micro-Manager-...'
```
## Contributing
Contributions are very welcome.
### Launching napari with plugin
You can launch napari and automatically load this plugin using the `launch-dev.py` script:
```bash
python launch-dev.py
```
Alternatively you can run:
```bash
napari -w napari-micromanager
```
## License
Distributed under the terms of the [BSD-3] license,
"napari-micromanager" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[file an issue]: https://github.com/pymmcore-plus/napari-micromanager/issues
[pip]: https://pypi.org/project/pip/
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