napari-result-stack


Namenapari-result-stack JSON
Version 0.0.1 PyPI version JSON
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home_pagehttps://github.com/hanjinliu/napari-result-stack
SummaryWidgets and type annotations for storing function results of any types
upload_time2023-01-27 12:34:24
maintainer
docs_urlNone
authorHanjin Liu
requires_python>=3.8
licenseBSD-3-Clause
keywords
VCS
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requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # napari-result-stack

[![License BSD-3](https://img.shields.io/pypi/l/napari-result-stack.svg?color=green)](https://github.com/hanjinliu/napari-result-stack/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/napari-result-stack.svg?color=green)](https://pypi.org/project/napari-result-stack)
[![Python Version](https://img.shields.io/pypi/pyversions/napari-result-stack.svg?color=green)](https://python.org)
[![tests](https://github.com/hanjinliu/napari-result-stack/workflows/tests/badge.svg)](https://github.com/hanjinliu/napari-result-stack/actions)
[![codecov](https://codecov.io/gh/hanjinliu/napari-result-stack/branch/main/graph/badge.svg)](https://codecov.io/gh/hanjinliu/napari-result-stack)
[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-result-stack)](https://napari-hub.org/plugins/napari-result-stack)

Widgets and type annotations for storing function results of any types.

## `Stored` type

Type `Stored[T]` is equivalent to `T` for the type checker, but `magicgui` is aware of this annotation and behaves as a "storage" for the `T` instances.

```python
from pathlib import Path
import pandas as pd
from magicgui import magicgui
from napari_result_stack import Stored

# Returned values will be stored in a result stack.
@magicgui
def provide_data(path: Path) -> Stored[pd.DataFrame]:
    return pd.read_csv(path)

# You can choose one of the values stored in the result stack
# for the argument `df` from a ComboBox widget.
@magicgui
def print_data(df: Stored[pd.DataFrame]):
    print(df)
```

![](https://github.com/hanjinliu/napari-result-stack/blob/main/images/demo-0.gif)

- Different types use different storage. e.g. `Stored[int]` and `Stored[str]` do not share the same place.
- Even for the same type, you can specify the second key to split the storage. e.g. `Stored[int]`, `Stored[int, 0]` and `Stored[int, "my-plugin-name"]` use the distinct storages.

## Manually store variables

`Stored.valuesof[T]` is a `list`-like object that returns a view of the values stored in `Stored[T]`. This value view is useful if you want to store values outside `@magicgui`.

```python
from magicgui.widgets import PushButton
from datetime import datetime
from napari_result_stack import Stored

button = PushButton(text="Click!")

@button.changed.connect
def _record_now():
    Stored.valuesof[datetime].append(datetime.now())

```

## Result stack widget

`napari-result-stack` provides a plugin widget that is helpful to inspect all the stored values.

![](https://github.com/hanjinliu/napari-result-stack/blob/main/images/demo-1.gif)


<details><summary>Show code</summary><div>

```python
from napari_result_stack import Stored
from magicgui import magicgui
import numpy as np
import pandas as pd

@magicgui
def f0() -> Stored[pd.DataFrame]:
    return pd.DataFrame(np.random.random((4, 3)))

@magicgui
def f1(x: Stored[pd.DataFrame]) -> Stored[float]:
    return np.mean(np.array(x))

viewer.window.add_dock_widget(f0, name="returns a DataFrame")
viewer.window.add_dock_widget(f1, name="mean of a DataFrame")
```

---
</div></details>



----------------------------------

This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.

<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started

and review the napari docs for plugin developers:
https://napari.org/stable/plugins/index.html
-->

## Installation

You can install `napari-result-stack` via [pip]:

    pip install napari-result-stack



To install latest development version :

    pip install git+https://github.com/hanjinliu/napari-result-stack.git


## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [BSD-3] license,
"napari-result-stack" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin

[file an issue]: https://github.com/hanjinliu/napari-result-stack/issues

[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/

            

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    "description": "# napari-result-stack\n\n[![License BSD-3](https://img.shields.io/pypi/l/napari-result-stack.svg?color=green)](https://github.com/hanjinliu/napari-result-stack/raw/main/LICENSE)\n[![PyPI](https://img.shields.io/pypi/v/napari-result-stack.svg?color=green)](https://pypi.org/project/napari-result-stack)\n[![Python Version](https://img.shields.io/pypi/pyversions/napari-result-stack.svg?color=green)](https://python.org)\n[![tests](https://github.com/hanjinliu/napari-result-stack/workflows/tests/badge.svg)](https://github.com/hanjinliu/napari-result-stack/actions)\n[![codecov](https://codecov.io/gh/hanjinliu/napari-result-stack/branch/main/graph/badge.svg)](https://codecov.io/gh/hanjinliu/napari-result-stack)\n[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-result-stack)](https://napari-hub.org/plugins/napari-result-stack)\n\nWidgets and type annotations for storing function results of any types.\n\n## `Stored` type\n\nType `Stored[T]` is equivalent to `T` for the type checker, but `magicgui` is aware of this annotation and behaves as a \"storage\" for the `T` instances.\n\n```python\nfrom pathlib import Path\nimport pandas as pd\nfrom magicgui import magicgui\nfrom napari_result_stack import Stored\n\n# Returned values will be stored in a result stack.\n@magicgui\ndef provide_data(path: Path) -> Stored[pd.DataFrame]:\n    return pd.read_csv(path)\n\n# You can choose one of the values stored in the result stack\n# for the argument `df` from a ComboBox widget.\n@magicgui\ndef print_data(df: Stored[pd.DataFrame]):\n    print(df)\n```\n\n![](https://github.com/hanjinliu/napari-result-stack/blob/main/images/demo-0.gif)\n\n- Different types use different storage. e.g. `Stored[int]` and `Stored[str]` do not share the same place.\n- Even for the same type, you can specify the second key to split the storage. e.g. `Stored[int]`, `Stored[int, 0]` and `Stored[int, \"my-plugin-name\"]` use the distinct storages.\n\n## Manually store variables\n\n`Stored.valuesof[T]` is a `list`-like object that returns a view of the values stored in `Stored[T]`. This value view is useful if you want to store values outside `@magicgui`.\n\n```python\nfrom magicgui.widgets import PushButton\nfrom datetime import datetime\nfrom napari_result_stack import Stored\n\nbutton = PushButton(text=\"Click!\")\n\n@button.changed.connect\ndef _record_now():\n    Stored.valuesof[datetime].append(datetime.now())\n\n```\n\n## Result stack widget\n\n`napari-result-stack` provides a plugin widget that is helpful to inspect all the stored values.\n\n![](https://github.com/hanjinliu/napari-result-stack/blob/main/images/demo-1.gif)\n\n\n<details><summary>Show code</summary><div>\n\n```python\nfrom napari_result_stack import Stored\nfrom magicgui import magicgui\nimport numpy as np\nimport pandas as pd\n\n@magicgui\ndef f0() -> Stored[pd.DataFrame]:\n    return pd.DataFrame(np.random.random((4, 3)))\n\n@magicgui\ndef f1(x: Stored[pd.DataFrame]) -> Stored[float]:\n    return np.mean(np.array(x))\n\nviewer.window.add_dock_widget(f0, name=\"returns a DataFrame\")\nviewer.window.add_dock_widget(f1, name=\"mean of a DataFrame\")\n```\n\n---\n</div></details>\n\n\n\n----------------------------------\n\nThis [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.\n\n<!--\nDon't miss the full getting started guide to set up your new package:\nhttps://github.com/napari/cookiecutter-napari-plugin#getting-started\n\nand review the napari docs for plugin developers:\nhttps://napari.org/stable/plugins/index.html\n-->\n\n## Installation\n\nYou can install `napari-result-stack` via [pip]:\n\n    pip install napari-result-stack\n\n\n\nTo install latest development version :\n\n    pip install git+https://github.com/hanjinliu/napari-result-stack.git\n\n\n## Contributing\n\nContributions are very welcome. 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