Name | napari-tomodl JSON |
Version |
0.0.9
JSON |
| download |
home_page | |
Summary | A plugin for optical projection tomography reconstruction with model-based neural networks. |
upload_time | 2023-03-20 21:47:49 |
maintainer | |
docs_url | None |
author | Marcos Antonio Obando |
requires_python | <=3.8.13 |
license | MIT |
keywords |
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VCS |
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bugtrack_url |
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requirements |
No requirements were recorded.
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Travis-CI |
No Travis.
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coveralls test coverage |
No coveralls.
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# napari-tomodl
[](https://github.com/marcoso96/napari-tomodl/raw/main/LICENSE)
[](https://pypi.org/project/napari-tomodl)
[](https://python.org)
[](https://github.com/marcoso96/napari-tomodl/actions)
[](https://codecov.io/gh/marcoso96/napari-tomodl)
[](https://napari-hub.org/plugins/napari-tomodl)
A plugin for optical projection tomography reconstruction with model-based neural networks.
----------------------------------
This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.
<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started
and review the napari docs for plugin developers:
https://napari.org/stable/plugins/index.html
-->
## Installation
This package requires [torch-radon] for optimized GPU tomographic reconstruction:
pip install 'torch-radon @ https://rosh-public.s3-eu-west-1.amazonaws.com/radon-v2/cuda-11.1/torch-1.8/torch_radon-2.0.0-cp38-cp38-linux_x86_64.whl'
and `PyTorch == 1.8.0` via wheel, whica can be downloaded and installed with:
pip install 'torch @ https://download.pytorch.org/whl/cu111/torch-1.8.0%%2Bcu111-cp38-cp38-linux_x86_64.whl'
You can install `napari-tomodl` via [pip]:
pip install napari-tomodl
## Contributing
Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.
## License
Distributed under the terms of the [MIT] license,
"napari-tomodl" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[napari]: https://github.com/napari/napari
[torch-radon]: https://github.com/matteo-ronchetti/torch-radon
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/
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