| Name | napari-tomodl JSON |
| Version |
0.0.9
JSON |
| download |
| home_page | |
| Summary | A plugin for optical projection tomography reconstruction with model-based neural networks. |
| upload_time | 2023-03-20 21:47:49 |
| maintainer | |
| docs_url | None |
| author | Marcos Antonio Obando |
| requires_python | <=3.8.13 |
| license | MIT |
| keywords |
|
| VCS |
|
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
# napari-tomodl
[](https://github.com/marcoso96/napari-tomodl/raw/main/LICENSE)
[](https://pypi.org/project/napari-tomodl)
[](https://python.org)
[](https://github.com/marcoso96/napari-tomodl/actions)
[](https://codecov.io/gh/marcoso96/napari-tomodl)
[](https://napari-hub.org/plugins/napari-tomodl)
A plugin for optical projection tomography reconstruction with model-based neural networks.
----------------------------------
This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.
<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started
and review the napari docs for plugin developers:
https://napari.org/stable/plugins/index.html
-->
## Installation
This package requires [torch-radon] for optimized GPU tomographic reconstruction:
pip install 'torch-radon @ https://rosh-public.s3-eu-west-1.amazonaws.com/radon-v2/cuda-11.1/torch-1.8/torch_radon-2.0.0-cp38-cp38-linux_x86_64.whl'
and `PyTorch == 1.8.0` via wheel, whica can be downloaded and installed with:
pip install 'torch @ https://download.pytorch.org/whl/cu111/torch-1.8.0%%2Bcu111-cp38-cp38-linux_x86_64.whl'
You can install `napari-tomodl` via [pip]:
pip install napari-tomodl
## Contributing
Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.
## License
Distributed under the terms of the [MIT] license,
"napari-tomodl" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[napari]: https://github.com/napari/napari
[torch-radon]: https://github.com/matteo-ronchetti/torch-radon
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/
Raw data
{
"_id": null,
"home_page": "",
"name": "napari-tomodl",
"maintainer": "",
"docs_url": null,
"requires_python": "<=3.8.13",
"maintainer_email": "",
"keywords": "",
"author": "Marcos Antonio Obando",
"author_email": "marcos.obando@ib.edu.ar",
"download_url": "https://files.pythonhosted.org/packages/19/7f/e9d9443428825156c06f2ea3ed1e8a52f3ffc0037112d391447fcaae4982/napari-tomodl-0.0.9.tar.gz",
"platform": null,
"description": "# napari-tomodl\n\n[](https://github.com/marcoso96/napari-tomodl/raw/main/LICENSE)\n[](https://pypi.org/project/napari-tomodl)\n[](https://python.org)\n[](https://github.com/marcoso96/napari-tomodl/actions)\n[](https://codecov.io/gh/marcoso96/napari-tomodl)\n[](https://napari-hub.org/plugins/napari-tomodl)\n\nA plugin for optical projection tomography reconstruction with model-based neural networks.\n\n----------------------------------\n\nThis [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.\n\n<!--\nDon't miss the full getting started guide to set up your new package:\nhttps://github.com/napari/cookiecutter-napari-plugin#getting-started\n\nand review the napari docs for plugin developers:\nhttps://napari.org/stable/plugins/index.html\n-->\n\n## Installation\n\nThis package requires [torch-radon] for optimized GPU tomographic reconstruction:\n\n pip install 'torch-radon @ https://rosh-public.s3-eu-west-1.amazonaws.com/radon-v2/cuda-11.1/torch-1.8/torch_radon-2.0.0-cp38-cp38-linux_x86_64.whl'\n\nand `PyTorch == 1.8.0` via wheel, whica can be downloaded and installed with: \n\n pip install 'torch @ https://download.pytorch.org/whl/cu111/torch-1.8.0%%2Bcu111-cp38-cp38-linux_x86_64.whl'\n\nYou can install `napari-tomodl` via [pip]:\n\n pip install napari-tomodl\n\n\n\n\n## Contributing\n\nContributions are very welcome. Tests can be run with [tox], please ensure\nthe coverage at least stays the same before you submit a pull request.\n\n## License\n\nDistributed under the terms of the [MIT] license,\n\"napari-tomodl\" is free and open source software\n\n## Issues\n\nIf you encounter any problems, please [file an issue] along with a detailed description.\n\n[napari]: https://github.com/napari/napari\n[Cookiecutter]: https://github.com/audreyr/cookiecutter\n[@napari]: https://github.com/napari\n[MIT]: http://opensource.org/licenses/MIT\n[BSD-3]: http://opensource.org/licenses/BSD-3-Clause\n[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt\n[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt\n[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0\n[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt\n[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin\n\n[napari]: https://github.com/napari/napari\n[torch-radon]: https://github.com/matteo-ronchetti/torch-radon\n[tox]: https://tox.readthedocs.io/en/latest/\n[pip]: https://pypi.org/project/pip/\n[PyPI]: https://pypi.org/\n",
"bugtrack_url": null,
"license": "MIT",
"summary": "A plugin for optical projection tomography reconstruction with model-based neural networks.",
"version": "0.0.9",
"split_keywords": [],
"urls": [
{
"comment_text": "",
"digests": {
"blake2b_256": "17c700b7fc93bef551247571a7908be349a02991e484c043555365692d9f31bc",
"md5": "a08076b0188badc2573b4c9df2b308fa",
"sha256": "21a733970b5d2812b80d37ea37a2950f0bae48548f33e854c5e375171134b70f"
},
"downloads": -1,
"filename": "napari_tomodl-0.0.9-py3-none-any.whl",
"has_sig": false,
"md5_digest": "a08076b0188badc2573b4c9df2b308fa",
"packagetype": "bdist_wheel",
"python_version": "py3",
"requires_python": "<=3.8.13",
"size": 24633,
"upload_time": "2023-03-20T21:47:46",
"upload_time_iso_8601": "2023-03-20T21:47:46.984946Z",
"url": "https://files.pythonhosted.org/packages/17/c7/00b7fc93bef551247571a7908be349a02991e484c043555365692d9f31bc/napari_tomodl-0.0.9-py3-none-any.whl",
"yanked": false,
"yanked_reason": null
},
{
"comment_text": "",
"digests": {
"blake2b_256": "197fe9d9443428825156c06f2ea3ed1e8a52f3ffc0037112d391447fcaae4982",
"md5": "9fb962f7656aff477c877ce8653355d9",
"sha256": "d14fbbd0eef28236770ef0241f9ac7de8d5203b1d054ef8056f6a0a833c7f187"
},
"downloads": -1,
"filename": "napari-tomodl-0.0.9.tar.gz",
"has_sig": false,
"md5_digest": "9fb962f7656aff477c877ce8653355d9",
"packagetype": "sdist",
"python_version": "source",
"requires_python": "<=3.8.13",
"size": 23246,
"upload_time": "2023-03-20T21:47:49",
"upload_time_iso_8601": "2023-03-20T21:47:49.837875Z",
"url": "https://files.pythonhosted.org/packages/19/7f/e9d9443428825156c06f2ea3ed1e8a52f3ffc0037112d391447fcaae4982/napari-tomodl-0.0.9.tar.gz",
"yanked": false,
"yanked_reason": null
}
],
"upload_time": "2023-03-20 21:47:49",
"github": false,
"gitlab": false,
"bitbucket": false,
"lcname": "napari-tomodl"
}
