| Name | numpythia JSON |
| Version |
1.2.0
JSON |
| download |
| home_page | http://github.com/scikit-hep/numpythia |
| Summary | The interface between PYTHIA and NumPy |
| upload_time | 2020-11-25 23:43:10 |
| maintainer | the Scikit-HEP admins |
| docs_url | None |
| author | |
| requires_python | >=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.* |
| license | GPLv3 |
| keywords |
|
| VCS |
 |
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
.. -*- mode: rst -*-
numpythia: The interface between PYTHIA and NumPy
=================================================
.. image:: https://img.shields.io/pypi/v/numpythia.svg
:target: https://pypi.python.org/pypi/numpythia
.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.1471492.svg
:target: https://doi.org/10.5281/zenodo.1471492
.. image:: https://github.com/scikit-hep/numpythia/workflows/Main/badge.svg?branch=master
:target: https://github.com/scikit-hep/numpythia/actions
:alt: Test status
.. image:: https://dev.azure.com/scikit-hep/numpythia/_apis/build/status/scikit-hep.pyjet?branchName=master
:target: https://dev.azure.com/scikit-hep/numpythia/_build/latest?definitionId=9&branchName=master
:alt: Wheel builds
numpythia provides an interface between `PYTHIA
<http://home.thep.lu.se/Pythia/>`_ and `NumPy
<http://www.numpy.org/>`_ allowing you to generate events as NumPy arrays of
particle four-momenta. By default numpythia only depends on NumPy and builds
internal copies of the PYTHIA and `HepMC <http://hepmc.web.cern.ch/hepmc/>`_
source code.
Standalone Installation
-----------------------
To simply use the built-in PYTHIA and HepMC::
pip install -v numpythia
And you're good to go!
Support for building against an external PYTHIA is on the wishlist.
Note that if you are using a Mac OSX system, then installation may require setting an
environment variable as `explained here <https://github.com/pytorch/pytorch/issues/1434>`_.
Strict dependencies
-------------------
- `Python <http://docs.python-guide.org/en/latest/starting/installation/>`__ (2.7+, 3.4+)
- `Numpy <https://scipy.org/install.html>`__
- `six <https://six.readthedocs.io/>`__
- Source builds: `Cython <https://cython.org/>`__ and a compiler.
Getting started
---------------
.. code-block:: python
>>> from numpythia import Pythia, hepmc_write, hepmc_read
>>> from numpythia import STATUS, HAS_END_VERTEX, ABS_PDG_ID
>>> from numpythia.testcmnd import get_cmnd
>>> from numpy.testing import assert_array_equal
>>> pythia = Pythia(get_cmnd('w'), random_state=1)
>>> selection = ((STATUS == 1) & ~HAS_END_VERTEX &
(ABS_PDG_ID != 12) & (ABS_PDG_ID != 14) & (ABS_PDG_ID != 16))
>>> # generate events while writing to ascii hepmc
>>> for event in hepmc_write('events.hepmc', pythia(events=1)):
>>> array1 = event.all(selection)
>>> # read the same event back from ascii hepmc
>>> for event in hepmc_read('events.hepmc'):
>>> array2 = event.all(selection)
>>> assert_array_equal(array1, array2)
True
The dtype of any array of particle information is:
.. code-block:: python
np.dtype([('E', 'f8'), ('px', 'f8'), ('py', 'f8'), ('pz', 'f8'), ('pt', 'f8'),
('mass', 'f8'), ('rap', 'f8'), ('eta', 'f8'), ('theta', 'f8'),
('phi', 'f8'), ('prodx', 'f8'), ('prody', 'f8'), ('prodz', 'f8'),
('prodt', 'f8'), ('pdgid', 'i4'), ('status', 'i4')])
Also see `pyjet <https://github.com/scikit-hep/pyjet>`_ for jet clustering.
Tutorial
--------
Setting PYTHIA
~~~~~~~~~~~~~~
PYTHIA settings can be passed in one of three ways: through the `**kwargs` arguments of the constructor `Pythia(..., **kwargs)`:
.. code-block:: python
>>> pythia = Pythia(..., Beams_eCM=13000.)
Or as a dictionary:
.. code-block:: python
>>> pythia = Pythia(..., params={'Beams:eCM': 13000.})
Or via a Python command file:
.. code-block:: python
>>> pythia = Pythia(config='path/to/config.cmd')
The full list of settings can be found on the `PYTHIA homepage <http://home.thep.lu.se/Pythia/>`_.
Note that the ":" in settings names is replaced by a "_" if using `kwargs`.
`kwargs` take precedence over `params` and they both take precedence over `config`.
Example config files can be found under the `numpythia.testcmnd` directory.
Generate events
~~~~~~~~~~~~~~~
To generate events do
.. code-block:: python
>>> events = pythia(events=100)
>>> events
<generator at 0x10cf06f78>
where **events** is a generator of ``GenEvent`` containing all the generated particles.
Generated particles can be accessed through the ``all``, ``first`` and ``last``
methods which have two optional arguments ``selection`` and ``return_hepmc``.
Selection is a filter or a combination of filters with bitwise operations (as
shown in the *getting started* example) applied on the particles in the event.
The available filters are
.. code-block:: python
STATUS, PDG_ID, ABS_PDG_ID, HAS_END_VERTEX, HAS_PRODUCTION_VERTEX,
HAS_SAME_PDG_ID_DAUGHTER, IS_STABLE, IS_BEAM
``return_hepmc`` is by default set to ``False`` when using ``all``:
.. code-block:: python
>>> for e in events:
>>> array = e.all(selection)
returns an array of particles, with the dtype described above. ``return_hepmc`` is
by default set to ``True`` for ``first`` and ``last``:
.. code-block:: python
>>> for e in events:
>>> gen_part_f = e.first(selection)
>>> gen_part_l = e.last(selection)
returns a ``GenParticle``.
Generated particle
~~~~~~~~~~~~~~~~~~
``GenParticle`` is the numpythia interface of
`HepMC::GenParticle <http://lcgapp.cern.ch/project/simu/HepMC/205/html/classHepMC_1_1GenParticle.html>`_,
and has the following attributes
.. code-block:: python
pid, status, e, px, py, pz, pt, eta, phi, mass, theta, rap
``GenParticle`` also has the following methods ``parents``, ``children``, ``ancestors``,
``descendants`` and ``siblings`` both with the two optional arguments ``selection``
and ``return_hepmc`` described before. For instance:
.. code-block:: python
>>> for e in events:
>>> w = e.last((ABS_PDG_ID == 24) & HAS_END_VERTEX))
>>> w.children()
array([(240.60708981, 115.76101664, 126.16766767, -169.03439984, 171.22760682, 0.5, -0.87228439, -0.87228739, 2.34974894, 0.82838703, 0., 0., 0., 0., 3, 23),
( 52.59241372, 9.21296404, 50.77873929, -10.01763001, 51.60774235, 1.5, -0.19283178, -0.19291222, 1.76252302, 1.39131523, 0., 0., 0., 0., -4, 23)],
dtype=[('E', '<f8'), ('px', '<f8'), ('py', '<f8'), ('pz', '<f8'), ('pT', '<f8'), ('mass', '<f8'), ('rap', '<f8'), ('eta', '<f8'), ('theta', '<f8'), ('phi', '<f8'), ('prodx', '<f8'), ('prody', '<f8'), ('prodz', '<f8'), ('prodt', '<f8'), ('pdgid', '<i4'), ('status', '<i4')])
Raw data
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"description": ".. -*- mode: rst -*-\n\nnumpythia: The interface between PYTHIA and NumPy\n=================================================\n\n.. image:: https://img.shields.io/pypi/v/numpythia.svg\n :target: https://pypi.python.org/pypi/numpythia\n\n.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.1471492.svg\n :target: https://doi.org/10.5281/zenodo.1471492\n\n.. image:: https://github.com/scikit-hep/numpythia/workflows/Main/badge.svg?branch=master\n :target: https://github.com/scikit-hep/numpythia/actions\n :alt: Test status\n\n.. image:: https://dev.azure.com/scikit-hep/numpythia/_apis/build/status/scikit-hep.pyjet?branchName=master\n :target: https://dev.azure.com/scikit-hep/numpythia/_build/latest?definitionId=9&branchName=master\n :alt: Wheel builds\n\nnumpythia provides an interface between `PYTHIA\n<http://home.thep.lu.se/Pythia/>`_ and `NumPy\n<http://www.numpy.org/>`_ allowing you to generate events as NumPy arrays of\nparticle four-momenta. By default numpythia only depends on NumPy and builds\ninternal copies of the PYTHIA and `HepMC <http://hepmc.web.cern.ch/hepmc/>`_\nsource code.\n\nStandalone Installation\n-----------------------\n\nTo simply use the built-in PYTHIA and HepMC::\n\n pip install -v numpythia\n\nAnd you're good to go!\n\nSupport for building against an external PYTHIA is on the wishlist.\n\nNote that if you are using a Mac OSX system, then installation may require setting an\nenvironment variable as `explained here <https://github.com/pytorch/pytorch/issues/1434>`_.\n\nStrict dependencies\n-------------------\n\n- `Python <http://docs.python-guide.org/en/latest/starting/installation/>`__ (2.7+, 3.4+)\n- `Numpy <https://scipy.org/install.html>`__\n- `six <https://six.readthedocs.io/>`__\n- Source builds: `Cython <https://cython.org/>`__ and a compiler.\n\nGetting started\n---------------\n\n.. code-block:: python\n\n >>> from numpythia import Pythia, hepmc_write, hepmc_read\n >>> from numpythia import STATUS, HAS_END_VERTEX, ABS_PDG_ID\n >>> from numpythia.testcmnd import get_cmnd\n >>> from numpy.testing import assert_array_equal\n\n >>> pythia = Pythia(get_cmnd('w'), random_state=1)\n\n >>> selection = ((STATUS == 1) & ~HAS_END_VERTEX &\n (ABS_PDG_ID != 12) & (ABS_PDG_ID != 14) & (ABS_PDG_ID != 16))\n\n >>> # generate events while writing to ascii hepmc\n >>> for event in hepmc_write('events.hepmc', pythia(events=1)):\n >>> array1 = event.all(selection)\n\n >>> # read the same event back from ascii hepmc\n >>> for event in hepmc_read('events.hepmc'):\n >>> array2 = event.all(selection)\n\n >>> assert_array_equal(array1, array2)\n True\n\nThe dtype of any array of particle information is:\n\n.. code-block:: python\n\n np.dtype([('E', 'f8'), ('px', 'f8'), ('py', 'f8'), ('pz', 'f8'), ('pt', 'f8'),\n ('mass', 'f8'), ('rap', 'f8'), ('eta', 'f8'), ('theta', 'f8'),\n ('phi', 'f8'), ('prodx', 'f8'), ('prody', 'f8'), ('prodz', 'f8'),\n ('prodt', 'f8'), ('pdgid', 'i4'), ('status', 'i4')])\n\nAlso see `pyjet <https://github.com/scikit-hep/pyjet>`_ for jet clustering.\n\nTutorial\n--------\n\nSetting PYTHIA\n~~~~~~~~~~~~~~\n\nPYTHIA settings can be passed in one of three ways: through the `**kwargs` arguments of the constructor `Pythia(..., **kwargs)`:\n\n.. code-block:: python\n\n >>> pythia = Pythia(..., Beams_eCM=13000.)\n\nOr as a dictionary:\n\n.. code-block:: python\n\n >>> pythia = Pythia(..., params={'Beams:eCM': 13000.})\n\nOr via a Python command file:\n\n.. code-block:: python\n\n >>> pythia = Pythia(config='path/to/config.cmd')\n\nThe full list of settings can be found on the `PYTHIA homepage <http://home.thep.lu.se/Pythia/>`_.\n\nNote that the \":\" in settings names is replaced by a \"_\" if using `kwargs`.\n`kwargs` take precedence over `params` and they both take precedence over `config`.\nExample config files can be found under the `numpythia.testcmnd` directory.\n\nGenerate events\n~~~~~~~~~~~~~~~\n\nTo generate events do\n\n.. code-block:: python\n\n >>> events = pythia(events=100)\n >>> events\n <generator at 0x10cf06f78>\n\nwhere **events** is a generator of ``GenEvent`` containing all the generated particles.\n\nGenerated particles can be accessed through the ``all``, ``first`` and ``last``\nmethods which have two optional arguments ``selection`` and ``return_hepmc``.\nSelection is a filter or a combination of filters with bitwise operations (as\nshown in the *getting started* example) applied on the particles in the event.\nThe available filters are\n\n.. code-block:: python\n\n STATUS, PDG_ID, ABS_PDG_ID, HAS_END_VERTEX, HAS_PRODUCTION_VERTEX,\n HAS_SAME_PDG_ID_DAUGHTER, IS_STABLE, IS_BEAM\n\n``return_hepmc`` is by default set to ``False`` when using ``all``:\n\n.. code-block:: python\n\n >>> for e in events:\n >>> array = e.all(selection)\n\nreturns an array of particles, with the dtype described above. ``return_hepmc`` is\nby default set to ``True`` for ``first`` and ``last``:\n\n.. code-block:: python\n\n >>> for e in events:\n >>> gen_part_f = e.first(selection)\n >>> gen_part_l = e.last(selection)\n\nreturns a ``GenParticle``.\n\nGenerated particle\n~~~~~~~~~~~~~~~~~~\n\n``GenParticle`` is the numpythia interface of\n`HepMC::GenParticle <http://lcgapp.cern.ch/project/simu/HepMC/205/html/classHepMC_1_1GenParticle.html>`_,\nand has the following attributes\n\n.. code-block:: python\n\n pid, status, e, px, py, pz, pt, eta, phi, mass, theta, rap\n\n``GenParticle`` also has the following methods ``parents``, ``children``, ``ancestors``,\n``descendants`` and ``siblings`` both with the two optional arguments ``selection``\nand ``return_hepmc`` described before. 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