open-ortho-terminology

Name	open-ortho-terminology JSON
Version	1.1.1 JSON
	download
home_page	None
Summary	A package for managing orthodontic codes and namespaces.
upload_time	2025-02-08 20:11:53
maintainer	None
docs_url	None
author	None
requires_python	>=3.11
license	## MIT License Copyright (c) 2024 Open-Ortho Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. ## Third-Party Content and Licenses This project, "Open-Ortho," includes data and codes that are sourced from external standards and organizations, including SNOMED CT, DICOM (DCM), HL7, and content from doctorseyes GmbH. The use of each of these data sets and codes is governed by their respective licenses and not by the MIT license of this project. ### External Licenses - SNOMED CT: SNOMED CT content is used under a license that can be reviewed at [SNOMED International](https://www.snomed.org/snomed-ct/get-snomed-ct). - DICOM (DCM): DICOM standards are published by the Medical Imaging & Technology Alliance (MITA) and are available under specific terms that can be found on the [NEMA website](https://www.nema.org/). - HL7: HL7 standards are used under terms available at [HL7 International](https://www.hl7.org/). - doctorseyes GmbH: Content provided by [doctorseyes GmbH](https://dentaleyepad.de/en/dentaleyepad-image-types/) is used under their terms and conditions, details of which can be found on their official website. ### Notice The MIT License applies only to the code and data developed as part of the Open-Ortho project itself. For the use of third-party content included in this project, please consult the corresponding licenses as listed above. Users are responsible for ensuring that they comply with all applicable licenses and terms of use when utilizing this software and its associated content.
keywords	orthodontics codes fhir healthcare snomed
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            [![Contributors][contributors-shield]][contributors-url]
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[![MIT License][license-shield]][license-url]
[![LinkedIn][linkedin-shield]][linkedin-url]

<!-- PROJECT LOGO -->
<br />
<p align="center">
  <a href="https://github.com/open-ortho/terminology">
    <img src="https://raw.githubusercontent.com/open-ortho/dicom4ortho/master/images/open-ortho.png" alt="Logo" width="80" height="80">
  </a>

  <h3 align="center">open-ortho terminology</h3>

  <p align="center">
    A collection of codes and terms from various terminologies, specifically tailored for software development within the orthodontic domain.
    <br />
    <a href="https://open-ortho.github.io/terminology/"><strong>Explore the docs »</strong></a>
    <br />
    <br />
    <a href="https://github.com/open-ortho/terminology">View Demo</a>
    ·
    <a href="https://github.com/open-ortho/terminology/issues">Report Bug</a>
    ·
    <a href="https://github.com/open-ortho/terminology/issues">Request Feature</a>
  </p>
</p>

## About The Project

This project serves as a centralized repository for orthodontic software developers, offering a curated collection of essential codes required for implementing healthcare standards like DICOM or HL7. Navigating through various terminologies to find the right codes can be challenging. Our project aims to simplify this process by providing a go-to source for these codes, readily available in JSON and CSV formats. Users can access these directly through GitHub releases or utilize them as a Python package on PyPI.

The primary aim of this project is to implement in FHIR Terminology the views and view sets defined in *AMERICAN NATIONAL STANDARD INSTITUTE/AMERICAN DENTAL ASSOCIATION STANDARD NO. 1100 – 2D and 3D Orthodontic/Craniofacial/Forensic Photographic Views and View Sets*. By adhering to the ADA1100 standard, we ensure that the codes and terminologies used in orthodontic software are consistent, accurate, and interoperable across different systems. This is not an official FHIR CodeSystem. The purpose for this site is to provide developers codes necessary to move forward with their development, while the codes get added and approved in official nomenclatures (like SNOMED-CT).

## Using The Codes

The codes systems and code values should be built by the Makefile and deployed in `/docs`, where github can serve them. This should serve as a static service, for CodeSystem definitions.

The codesystems are availble through the following official URLs:

- http://terminology.open-ortho.org/fhir/extraoral-2d-photographic-scheduled-protocol
- http://terminology.open-ortho.org/fhir/intraoral-2d-photographic-scheduled-protocol
- http://terminology.open-ortho.org/fhir/extraoral-3d-visible-light-scheduled-protocol
- http://terminology.open-ortho.org/fhir/intraoral-3d-visible-light-scheduled-protocol

### Python

If you want to use the codes directly in your Python project:

    pip install open-ortho-terminology

Then

    from terminology.resources.code_systems.extraoral_3d_visible_light_views import EV3D01, EV3D02, EV3D03 

    print(EV3D01.code)
    print(EV3D01.display)
    print(EV3D01.definition)

Convert codes to JSON

    print(EV3D01.model_dump())

Import the entire codesystem:

    >>> from terminology.resources.code_systems.extraoral_3d_visible_light_views import Extraoral3DVisibleLightScheduledProtocolCodeSystem
    >>> ev = Extraoral3DVisibleLightScheduledProtocolCodeSystem()
    >>> ev.model_dump()
    {'resourceType': 'CodeSystem', 'url': 'http://terminology.open-ortho.org/fhir/extraoral-3d-visible-light-views', 'version': '1.0.0', 'name': 'Extraoral3DVisibleLightViews', 'title': 'Extraoral 3D Visible Light Views', 'status': 'draft', 'experimental': True, 'date': '2025-01-14', 'publisher': 'Open Ortho', 'description': "Common extraoral 3D visible light views used in an orthodontic provider's practice, producing a 3D surface of the head and neck", 'caseSensitive': True, 'content': 'complete', 'concept': [{'code': 'EV3D01', 'display': 'EV3D-01 EO.WH.LC.CO', 'definition': 'Whole head, lips closed, centric occlusion'}, {'code': 'EV3D02', 'display': 'EV3D-02 EO.WH.LC.CR', 'definition': 'Whole head, lips closed, centric relation'}, {'code': 'EV3D03', 'display': 'EV3D-03 EO.WH.LR.CO', 'definition': 'Whole head, lips relaxed, centric occlusion'}, {'code': 'EV3D04', 'display': 'EV3D-04 EO.WH.LR.CR', 'definition': 'Whole head, lips relaxed, centric relation'}, {'code': 'EV3D05', 'display': 'EV3D-05 EO.WH.FS.CO', 'definition': 'Whole head, full smile, centric occlusion'}, {'code': 'EV3D06', 'display': 'EV3D-06 EO.WH.FS.CR', 'definition': 'Whole head, full smile, centric relation'}]}
    >>> ev.concept[0].model_dump()
    {'code': 'EV3D01', 'display': 'EV3D-01 EO.WH.LC.CO', 'definition': 'Whole head, lips closed, centric occlusion'}
    >>> ev.concept
    [CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D01', code__ext=None, concept=None, definition='Whole head, lips closed, centric occlusion', definition__ext=None, designation=None, display='EV3D-01 EO.WH.LC.CO', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D02', code__ext=None, concept=None, definition='Whole head, lips closed, centric relation', definition__ext=None, designation=None, display='EV3D-02 EO.WH.LC.CR', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D03', code__ext=None, concept=None, definition='Whole head, lips relaxed, centric occlusion', definition__ext=None, designation=None, display='EV3D-03 EO.WH.LR.CO', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D04', code__ext=None, concept=None, definition='Whole head, lips relaxed, centric relation', definition__ext=None, designation=None, display='EV3D-04 EO.WH.LR.CR', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D05', code__ext=None, concept=None, definition='Whole head, full smile, centric occlusion', definition__ext=None, designation=None, display='EV3D-05 EO.WH.FS.CO', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D06', code__ext=None, concept=None, definition='Whole head, full smile, centric relation', definition__ext=None, designation=None, display='EV3D-06 EO.WH.FS.CR', display__ext=None, property=None)]


## Releases

- Each new release must be git tagged with v*.*.*. This triggers the Github actions to publish to PyPi and release in GitHub releases.
- Project version should only be stored in the `pyproject.toml` file in `project.version`, and imported accordingly when needed.
- Each CodeSystem and CodeValue has its own version which depends on changes to that: remember to bump those individually.
- No need for Github actions: just build with `make build`, which will build in `docs/` which is configured by github-pages to serve to http://terminology.open-ortho.org and http://open-ortho.org/terminology.

<!-- MARKDOWN LINKS & IMAGES -->
<!-- https://www.markdownguide.org/basic-syntax/#reference-style-links -->
[contributors-shield]: https://img.shields.io/github/contributors/open-ortho/terminology.svg?style=for-the-badge
[contributors-url]: https://github.com/open-ortho/terminology/graphs/contributors
[forks-shield]: https://img.shields.io/github/forks/open-ortho/terminology.svg?style=for-the-badge
[forks-url]: https://github.com/open-ortho/terminology/network/members
[stars-shield]: https://img.shields.io/github/stars/open-ortho/terminology.svg?style=for-the-badge
[stars-url]: https://github.com/open-ortho/terminology/stargazers
[issues-shield]: https://img.shields.io/github/issues/open-ortho/terminology.svg?style=for-the-badge
[issues-url]: https://github.com/open-ortho/terminology/issues
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[license-url]: https://github.com/open-ortho/terminology/blob/master/LICENSE
[linkedin-shield]: https://img.shields.io/badge/-LinkedIn-black.svg?style=for-the-badge&logo=linkedin&colorB=555
[linkedin-url]: https://linkedin.com/in/open-ortho
[product-screenshot]: images/screenshot.png
[example-csv-url]: resources/example/input_from.csv

Raw data

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    "description": "[![Contributors][contributors-shield]][contributors-url]\n[![Forks][forks-shield]][forks-url]\n[![Stargazers][stars-shield]][stars-url]\n[![Issues][issues-shield]][issues-url]\n[![MIT License][license-shield]][license-url]\n[![LinkedIn][linkedin-shield]][linkedin-url]\n\n<!-- PROJECT LOGO -->\n<br />\n<p align=\"center\">\n  <a href=\"https://github.com/open-ortho/terminology\">\n    <img src=\"https://raw.githubusercontent.com/open-ortho/dicom4ortho/master/images/open-ortho.png\" alt=\"Logo\" width=\"80\" height=\"80\">\n  </a>\n\n  <h3 align=\"center\">open-ortho terminology</h3>\n\n  <p align=\"center\">\n    A collection of codes and terms from various terminologies, specifically tailored for software development within the orthodontic domain.\n    <br />\n    <a href=\"https://open-ortho.github.io/terminology/\"><strong>Explore the docs \u00bb</strong></a>\n    <br />\n    <br />\n    <a href=\"https://github.com/open-ortho/terminology\">View Demo</a>\n    \u00b7\n    <a href=\"https://github.com/open-ortho/terminology/issues\">Report Bug</a>\n    \u00b7\n    <a href=\"https://github.com/open-ortho/terminology/issues\">Request Feature</a>\n  </p>\n</p>\n\n## About The Project\n\nThis project serves as a centralized repository for orthodontic software developers, offering a curated collection of essential codes required for implementing healthcare standards like DICOM or HL7. Navigating through various terminologies to find the right codes can be challenging. Our project aims to simplify this process by providing a go-to source for these codes, readily available in JSON and CSV formats. Users can access these directly through GitHub releases or utilize them as a Python package on PyPI.\n\nThe primary aim of this project is to implement in FHIR Terminology the views and view sets defined in *AMERICAN NATIONAL STANDARD INSTITUTE/AMERICAN DENTAL ASSOCIATION STANDARD NO. 1100 \u2013 2D and 3D Orthodontic/Craniofacial/Forensic Photographic Views and View Sets*. By adhering to the ADA1100 standard, we ensure that the codes and terminologies used in orthodontic software are consistent, accurate, and interoperable across different systems. This is not an official FHIR CodeSystem. The purpose for this site is to provide developers codes necessary to move forward with their development, while the codes get added and approved in official nomenclatures (like SNOMED-CT).\n\n## Using The Codes\n\nThe codes systems and code values should be built by the Makefile and deployed in `/docs`, where github can serve them. This should serve as a static service, for CodeSystem definitions.\n\nThe codesystems are availble through the following official URLs:\n\n- http://terminology.open-ortho.org/fhir/extraoral-2d-photographic-scheduled-protocol\n- http://terminology.open-ortho.org/fhir/intraoral-2d-photographic-scheduled-protocol\n- http://terminology.open-ortho.org/fhir/extraoral-3d-visible-light-scheduled-protocol\n- http://terminology.open-ortho.org/fhir/intraoral-3d-visible-light-scheduled-protocol\n\n### Python\n\nIf you want to use the codes directly in your Python project:\n\n    pip install open-ortho-terminology\n\nThen\n\n    from terminology.resources.code_systems.extraoral_3d_visible_light_views import EV3D01, EV3D02, EV3D03 \n\n    print(EV3D01.code)\n    print(EV3D01.display)\n    print(EV3D01.definition)\n\nConvert codes to JSON\n\n    print(EV3D01.model_dump())\n\nImport the entire codesystem:\n\n    >>> from terminology.resources.code_systems.extraoral_3d_visible_light_views import Extraoral3DVisibleLightScheduledProtocolCodeSystem\n    >>> ev = Extraoral3DVisibleLightScheduledProtocolCodeSystem()\n    >>> ev.model_dump()\n    {'resourceType': 'CodeSystem', 'url': 'http://terminology.open-ortho.org/fhir/extraoral-3d-visible-light-views', 'version': '1.0.0', 'name': 'Extraoral3DVisibleLightViews', 'title': 'Extraoral 3D Visible Light Views', 'status': 'draft', 'experimental': True, 'date': '2025-01-14', 'publisher': 'Open Ortho', 'description': \"Common extraoral 3D visible light views used in an orthodontic provider's practice, producing a 3D surface of the head and neck\", 'caseSensitive': True, 'content': 'complete', 'concept': [{'code': 'EV3D01', 'display': 'EV3D-01 EO.WH.LC.CO', 'definition': 'Whole head, lips closed, centric occlusion'}, {'code': 'EV3D02', 'display': 'EV3D-02 EO.WH.LC.CR', 'definition': 'Whole head, lips closed, centric relation'}, {'code': 'EV3D03', 'display': 'EV3D-03 EO.WH.LR.CO', 'definition': 'Whole head, lips relaxed, centric occlusion'}, {'code': 'EV3D04', 'display': 'EV3D-04 EO.WH.LR.CR', 'definition': 'Whole head, lips relaxed, centric relation'}, {'code': 'EV3D05', 'display': 'EV3D-05 EO.WH.FS.CO', 'definition': 'Whole head, full smile, centric occlusion'}, {'code': 'EV3D06', 'display': 'EV3D-06 EO.WH.FS.CR', 'definition': 'Whole head, full smile, centric relation'}]}\n    >>> ev.concept[0].model_dump()\n    {'code': 'EV3D01', 'display': 'EV3D-01 EO.WH.LC.CO', 'definition': 'Whole head, lips closed, centric occlusion'}\n    >>> ev.concept\n    [CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D01', code__ext=None, concept=None, definition='Whole head, lips closed, centric occlusion', definition__ext=None, designation=None, display='EV3D-01 EO.WH.LC.CO', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D02', code__ext=None, concept=None, definition='Whole head, lips closed, centric relation', definition__ext=None, designation=None, display='EV3D-02 EO.WH.LC.CR', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D03', code__ext=None, concept=None, definition='Whole head, lips relaxed, centric occlusion', definition__ext=None, designation=None, display='EV3D-03 EO.WH.LR.CO', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D04', code__ext=None, concept=None, definition='Whole head, lips relaxed, centric relation', definition__ext=None, designation=None, display='EV3D-04 EO.WH.LR.CR', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D05', code__ext=None, concept=None, definition='Whole head, full smile, centric occlusion', definition__ext=None, designation=None, display='EV3D-05 EO.WH.FS.CO', display__ext=None, property=None), CodeSystemConcept(fhir_comments=None, extension=None, id=None, modifierExtension=None, code='EV3D06', code__ext=None, concept=None, definition='Whole head, full smile, centric relation', definition__ext=None, designation=None, display='EV3D-06 EO.WH.FS.CR', display__ext=None, property=None)]\n\n\n## Releases\n\n- Each new release must be git tagged with v*.*.*. This triggers the Github actions to publish to PyPi and release in GitHub releases.\n- Project version should only be stored in the `pyproject.toml` file in `project.version`, and imported accordingly when needed.\n- Each CodeSystem and CodeValue has its own version which depends on changes to that: remember to bump those individually.\n- No need for Github actions: just build with `make build`, which will build in `docs/` which is configured by github-pages to serve to http://terminology.open-ortho.org and http://open-ortho.org/terminology.\n\n<!-- MARKDOWN LINKS & IMAGES -->\n<!-- https://www.markdownguide.org/basic-syntax/#reference-style-links -->\n[contributors-shield]: https://img.shields.io/github/contributors/open-ortho/terminology.svg?style=for-the-badge\n[contributors-url]: https://github.com/open-ortho/terminology/graphs/contributors\n[forks-shield]: https://img.shields.io/github/forks/open-ortho/terminology.svg?style=for-the-badge\n[forks-url]: https://github.com/open-ortho/terminology/network/members\n[stars-shield]: https://img.shields.io/github/stars/open-ortho/terminology.svg?style=for-the-badge\n[stars-url]: https://github.com/open-ortho/terminology/stargazers\n[issues-shield]: https://img.shields.io/github/issues/open-ortho/terminology.svg?style=for-the-badge\n[issues-url]: https://github.com/open-ortho/terminology/issues\n[license-shield]: https://img.shields.io/github/license/open-ortho/terminology.svg?style=for-the-badge\n[license-url]: https://github.com/open-ortho/terminology/blob/master/LICENSE\n[linkedin-shield]: https://img.shields.io/badge/-LinkedIn-black.svg?style=for-the-badge&logo=linkedin&colorB=555\n[linkedin-url]: https://linkedin.com/in/open-ortho\n[product-screenshot]: images/screenshot.png\n[example-csv-url]: resources/example/input_from.csv\n",
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    "license": "## MIT License\n        \n        Copyright (c) 2024 Open-Ortho\n        \n        Permission is hereby granted, free of charge, to any person obtaining a copy\n        of this software and associated documentation files (the \"Software\"), to deal\n        in the Software without restriction, including without limitation the rights\n        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell\n        copies of the Software, and to permit persons to whom the Software is\n        furnished to do so, subject to the following conditions:\n        \n        The above copyright notice and this permission notice shall be included in all\n        copies or substantial portions of the Software.\n        \n        THE SOFTWARE IS PROVIDED \"AS IS\", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR\n        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,\n        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE\n        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER\n        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,\n        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE\n        SOFTWARE.\n        \n        ## Third-Party Content and Licenses\n        \n        This project, \"Open-Ortho,\" includes data and codes that are sourced from external standards and organizations, including SNOMED CT, DICOM (DCM), HL7, and content from doctorseyes GmbH. The use of each of these data sets and codes is governed by their respective licenses and not by the MIT license of this project. \n        \n        ### External Licenses\n        \n        - **SNOMED CT**: SNOMED CT content is used under a license that can be reviewed at [SNOMED International](https://www.snomed.org/snomed-ct/get-snomed-ct).\n        - **DICOM (DCM)**: DICOM standards are published by the Medical Imaging & Technology Alliance (MITA) and are available under specific terms that can be found on the [NEMA website](https://www.nema.org/).\n        - **HL7**: HL7 standards are used under terms available at [HL7 International](https://www.hl7.org/).\n        - **doctorseyes GmbH**: Content provided by [doctorseyes GmbH](https://dentaleyepad.de/en/dentaleyepad-image-types/) is used under their terms and conditions, details of which can be found on their official website.\n        \n        ### Notice\n        \n        The MIT License applies only to the code and data developed as part of the Open-Ortho project itself. For the use of third-party content included in this project, please consult the corresponding licenses as listed above. Users are responsible for ensuring that they comply with all applicable licenses and terms of use when utilizing this software and its associated content.\n        ",
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