patientMatcher


NamepatientMatcher JSON
Version 4.5 PyPI version JSON
download
home_pagehttps://github.com/Clinical-Genomics/patientMatcher
SummaryA python and MongoDB-based Matchmaker Exchange server
upload_time2023-11-07 10:01:34
maintainer
docs_urlNone
authorChiara Rasi
requires_python
licenseMIT
keywords matchmaker exchange genes matchmaker rare diseases genomics genotype phenotype patients genetic disease
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            
# patientMatcher - a Python and MongoDB - based MatchMaker Exchange server
![Build Status - GitHub][actions-build-status]
[![DOI](https://zenodo.org/badge/DOI/10.1002/humu.24358.svg)](https://doi.org/10.1002/humu.24358)


PatientMatcher is a **Python** (Flask) and **MongoDB** - based implementation of a [MatchMaker Exchange](https://www.matchmakerexchange.org/) (MME) server, developed and actively maintained by [Clinical Genomics, Science For Life Laboratory in Stockholm](https://www.scilifelab.se/units/clinical-genomics-stockholm/). PatientMatcher is designed as a standalone application, but can easily communicate with external applications via REST API. The MME Stockholm node is being implemented in clinical production in collaboration with the Genomic Medicine Center Karolinska at the Karolinska University Hospital.    

Info on how to test PatientMatcher or to set up a server containing an app frontend and backend is available on the [documentation pages](https://clinical-genomics.github.io/patientMatcher).


[actions-build-status]: https://github.com/Clinical-Genomics/patientMatcher/actions/workflows/docker_build_n_publish_stage.yml/badge.svg


            

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