peccary


Namepeccary JSON
Version 0.1.1 PyPI version JSON
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SummaryPackage for identifying regular, complex, and stochastic behavior in timeseries
upload_time2024-07-22 18:52:45
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authorNone
requires_python>=3.8
licenseMIT License Copyright (c) 2024 Sóley Hyman Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
keywords astrophysics dynamics physics plasma plasma physics science chaos permutation entropy statistical complexity peccary
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            |logo|

*******
PECCARY
*******
|PyPI| |License|

PECCARY (Permutation Entropy and statistiCal Complexity Analysis for astRophYsics) 
is a pure-python package for distinguishing between regular, complex, and stochastic
behavior in timeseries. It is based on the work by 
`Bandt & Pompe (2002) <https://ui.adsabs.harvard.edu/#abs/2002PhRvL..88q4102B/abstract>`__ , 
`Rosso et al. (2007) <https://ui.adsabs.harvard.edu/#abs/2007PhRvL..99o4102R/abstract>`__ , 
and `Weck et al. (2015) <https://ui.adsabs.harvard.edu/#abs/2015PhRvE..91b3101W/abstract>`__.
This code is also based on work by collaborator David Schaffner, who wrote the initial 
version of some of the method, called `PESCy <https://github.com/dschaffner/PESCy>`__.

In addition to calculating the Permutation Entropy ($H$) and Statistical Complexity
($C$) values, this package also has plotting tools for the $HC$-plane and visualizing the 
resulting $[H,C]$ values for various timeseries.

A detailed summary of the PECCARY method can be found in Hyman, Daniel, & Schaffner (`arXiv:2407.11970 <https://arxiv.org/abs/2407.11970>`__). 
If you make use of PECCARY, please include a citation to Hyman, Daniel, & Schaffner (`arXiv:2407.11970 <https://arxiv.org/abs/2407.11970>`__)
in any publications.

Documentation
-------------
|Documentation Status|

The documentation for ``peccary`` is hosted on `Read the Docs <http://peccary.readthedocs.io>`__.

Installation and Dependencies
-----------------------------

The recommended way to install the latest stable version of ``peccary`` 
is with ``pip`` via the terminal with the command:

>>> pip install peccary

You can also use the command:

>>> python -m pip install peccary

See the `installation instructions <https://peccary.readthedocs.io/en/latest/installation.html>`__
in the `documentation <https://peccary.readthedocs.io>`__ for more instructions.

.. |PyPI| image:: https://badge.fury.io/py/peccary.svg
   :target: https://pypi.org/project/peccary/
.. |Documentation Status| image:: https://readthedocs.org/projects/peccary/badge/?version=latest
   :target: http://peccary.readthedocs.io/en/latest/?badge=latest
.. |logo| image:: https://peccary.readthedocs.io/en/latest/_static/peccary-logo-banner.png
   :target: https://github.com/soleyhyman/peccary
   :width: 400
.. |License| image:: http://img.shields.io/badge/license-MIT-blue.svg?style=flat
   :target: https://github.com/soleyhyman/peccary/blob/main/LICENSE

            

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