phippery

Name	phippery JSON
Version	1.2.0 JSON
	download
home_page
Summary	Tools for analyzing PhIP-Seq Data.
upload_time	2023-06-23 18:01:46
maintainer
docs_url	None
author
requires_python	>=3.6
license
keywords	phippery phipseq phage modeling phip
VCS
bugtrack_url
requirements	No requirements were recorded.
Travis-CI	No Travis.
coveralls test coverage	No coveralls.

            # Phippery

<p>
  <img src="data/cartoons/Xarray_function.png" width="250">
</p>

[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
[![Docker Repository on Quay](https://quay.io/repository/matsengrp/phippery/status "Docker Repository on Quay")](https://quay.io/repository/matsengrp/phippery)
[![build and test](https://github.com/matsengrp/phippery/workflows/build%20and%20test/badge.svg)](https://github.com/matsengrp/phippery/blob/master/.github/workflows/build-and-test.yaml)

A set of functions designed to query an 
[xarray DataSet](http://xarray.pydata.org/en/stable/user-guide/data-structures.html#dataset) 
object formatted to tie enrichment data with 
their respective row & column (peptide & sample) annotations. 

Please see the 
[documentation](https://matsengrp.github.io/phippery/) 
for further details.

## Developer Install

```
# using venv
python -m venv phippery_dev_env
source phippery_dev_env/bin/activate

# install
git clone https://github.com/matsengrp/phippery.git
(cd phippery && pip install -e ".[dev]")
```


            

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