plotnineseqsuite


Nameplotnineseqsuite JSON
Version 1.1.0 PyPI version JSON
download
home_pagehttps://github.com/caotianze/plotnineseqsuite
SummaryA Python package for visualizing sequence data using ggplot2 style
upload_time2024-03-08 05:14:49
maintainer
docs_urlNone
authorCao Tianze
requires_python>=3.11
licenseMIT
keywords ggplot2 plotnine bioinformatics tool sequence logo sequence alignment
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            # plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style
## Cite this work
Cao, T., Li, Q., Huang, Y. et al. plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style. BMC Genomics 24, 585 (2023). https://doi.org/10.1186/s12864-023-09677-8
## Installation
`pip install plotnineseqsuite`
## Getting Started
See [plotnineSeqSuite Documentation](https://caotianze.github.io/plotnineseqsuite/) 
## Gallery
![https://caotianze.github.io/plotnineseqsuite/gallery.png](https://caotianze.github.io/plotnineseqsuite/gallery.png)
## Development environment 
PyCharm 2023.2 (Community Edition) and Spyder version: 5.4.3  (conda)
## Dependencies
Python version: 3.11.4 64-bit    
plotnine: 0.13.1
## Similar projects
R package [ggmsa](https://github.com/YuLab-SMU/ggmsa) and [ggseqlogo](https://github.com/omarwagih/ggseqlogo)
## Derivative projects
- [Pyggseqlogo](https://github.com/CaoTianze/pyggseqlogo): Python version of ggseqlogo. 

            

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