# Portal Pipeline Utilities
Utilities for deploying pipelines and interfacing with portal infrastructure.
For more information on available commands and how to contribute and deploy pipelines within the infrastructure check the extended [*documentation*](https://portal-pipeline-utils.readthedocs.io/en/latest/ "portal-pipeline-utils documentation").
## Install
The software is python based. To install the software and the required packages, we recommend using a fresh virtual environment.
Please refer to `pyproject.toml` for the supported Python versions.
The package is available on [*pypi*](https://pypi.org/project/portal-pipeline-utils "portal-pipeline-utils pypi"):
pip install portal-pipeline-utils
To install from source:
git clone https://github.com/dbmi-bgm/portal-pipeline-utils.git
cd portal-pipeline-utils
make configure
make update
make build
To check that the software is correctly installed, try to run `pipeline_utils`. If installed from source, this command may fail with a bash “command not found” error, try `poetry run pipeline_utils` instead.
See `make info` for details on make targets.
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