pykofamsearch


Namepykofamsearch JSON
Version 2025.9.5 PyPI version JSON
download
home_pagehttps://github.com/jolespin/pykofamsearch
SummaryFast implementation of KofamScan optimized for high-memory systems using PyHmmer
upload_time2025-09-05 17:49:36
maintainerNone
docs_urlNone
authorJosh L. Espinoza
requires_pythonNone
licenseMIT License
keywords
VCS
bugtrack_url
requirements pyhmmer pandas tqdm requests biopython
Travis-CI No Travis.
coveralls test coverage No coveralls.
            
            

Raw data

            {
    "_id": null,
    "home_page": "https://github.com/jolespin/pykofamsearch",
    "name": "pykofamsearch",
    "maintainer": null,
    "docs_url": null,
    "requires_python": null,
    "maintainer_email": null,
    "keywords": null,
    "author": "Josh L. Espinoza",
    "author_email": "jol.espinoz@gmail.com",
    "download_url": "https://files.pythonhosted.org/packages/17/bd/cb18bc52c2a690cf40bd08dbe36d1712a9813f7feb4f9b4a507f5ca3c1c5/pykofamsearch-2025.9.5.tar.gz",
    "platform": null,
    "description": "",
    "bugtrack_url": null,
    "license": "MIT License",
    "summary": "Fast implementation of KofamScan optimized for high-memory systems using PyHmmer",
    "version": "2025.9.5",
    "project_urls": {
        "Homepage": "https://github.com/jolespin/pykofamsearch"
    },
    "split_keywords": [],
    "urls": [
        {
            "comment_text": null,
            "digests": {
                "blake2b_256": "17bdcb18bc52c2a690cf40bd08dbe36d1712a9813f7feb4f9b4a507f5ca3c1c5",
                "md5": "aebdb800db3b8e116d33963bddd3c6be",
                "sha256": "0828c3856d3ad4fe6f382a35e1435a9040c46bfa706f2fc80436e717edffa7c2"
            },
            "downloads": -1,
            "filename": "pykofamsearch-2025.9.5.tar.gz",
            "has_sig": false,
            "md5_digest": "aebdb800db3b8e116d33963bddd3c6be",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 12361,
            "upload_time": "2025-09-05T17:49:36",
            "upload_time_iso_8601": "2025-09-05T17:49:36.102860Z",
            "url": "https://files.pythonhosted.org/packages/17/bd/cb18bc52c2a690cf40bd08dbe36d1712a9813f7feb4f9b4a507f5ca3c1c5/pykofamsearch-2025.9.5.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2025-09-05 17:49:36",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "github_user": "jolespin",
    "github_project": "pykofamsearch",
    "travis_ci": false,
    "coveralls": false,
    "github_actions": false,
    "requirements": [
        {
            "name": "pyhmmer",
            "specs": [
                [
                    ">=",
                    "0.10.12"
                ],
                [
                    "<",
                    "0.11.0"
                ]
            ]
        },
        {
            "name": "pandas",
            "specs": []
        },
        {
            "name": "tqdm",
            "specs": []
        },
        {
            "name": "requests",
            "specs": []
        },
        {
            "name": "biopython",
            "specs": []
        }
    ],
    "lcname": "pykofamsearch"
}
        
Elapsed time: 1.02241s