# PySEGUL
[](https://badge.fury.io/py/pysegul)
PySEGUL is a python bindings of the [SEGUL](https://segul.app) high-performance and memory-efficient phylogenomic tools. It is well-suited for large-scale phylogenomic projects involving thousands of loci, but it is just as capable of handling small Sanger sequences effectively.
Learn more on using PySEGUL in the [documentation](https://www.segul.app/docs/api-usage/python/intro).
## Quick Start
```bash
pip install pysegul
```
To concatenate alignments:
```python
import pysegul
def concat_alignments():
input_dir = 'tests/concat'
input_format = 'nexus'
datatype = 'dna'
output_format = 'fasta'
partition_format = 'raxml'
prefix = 'concatenated'
output_dir = 'results/concat'
concat = pysegul.AlignmentConcatenation(
input_format,
datatype,
output_dir,
output_format,
partition_format,
prefix
)
concat.from_dir(input_dir)
if __name__ == '__main__':
concat_alignments()
```
Raw data
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