<p align="center">
<a href="https://github.com/Intsights/PySubstringSearch">
<img src="https://raw.githubusercontent.com/Intsights/PySubstringSearch/master/images/logo.png" alt="Logo">
</a>
<h3 align="center">
A Python library written in Rust that searches for substrings quickly using a Suffix Array
</h3>
</p>
[](https://pypi.org/project/PySubstringSearch/)
## Table of Contents
- [Table of Contents](#table-of-contents)
- [About The Project](#about-the-project)
- [Built With](#built-with)
- [Performance](#performance)
- [500MB File](#500mb-file)
- [7500MB File](#7500mb-file)
- [Installation](#installation)
- [Usage](#usage)
- [License](#license)
- [Contact](#contact)
## About The Project
PySubstringSearch is a library designed to search over an index file for substring patterns. In order to achieve speed and efficiency, the library is written in Rust. For string indexing, the library uses [libsais](https://github.com/IlyaGrebnov/libsais) suffix array construction library. The index created consists of the original text and a 32bit suffix array struct. To get around the limitations of the Suffix Array Construction implementation, the library uses a proprietary container protocol to hold the original text and index in chunks of 512MB.
The module implements a method for searching.
- `search` - Find different entries with the same substring concurrently. Concurrency increases as the index file grows in size with multiple inner chunks.
- `search_multiple` - same as `search` but accepts multiple substrings in a single call
### Built With
* [libsais](https://github.com/IlyaGrebnov/libsais)
### Performance
#### 500MB File
| Library | Function | Time | #Results | Improvement Factor |
| ------------- | ------------- | ------------- | ------------- | ------------- |
| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('google', '500mb').run().as_string.split('\n') | 47.2ms | 5943 | 1.0x |
| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('google') | 497µs | 5943 | 95x |
| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('text_two', '500mb').run().as_string.split('\n') | 44.7ms | 159 | 1.0x |
| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('text_two') | 14.9µs | 159 | 3000x |
#### 7500MB File
| Library | Function | Time | #Results | Improvement Factor |
| ------------- | ------------- | ------------- | ------------- | ------------- |
| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('google', '6000mb').run().as_string.split('\n') | 900ms | 62834 | 1.0x |
| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('google') | 10.1ms | 62834 | 89.1x |
| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('text_two', '6000mb').run().as_string.split('\n') | 820ms | 0 | 1.0x |
| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('text_two') | 200µs | 0 | 4100x |
### Installation
```sh
pip3 install PySubstringSearch
```
## Usage
Create an index
```python
import pysubstringsearch
# creating a new index file
# if a file with this name is already exists, it will be overwritten
writer = pysubstringsearch.Writer(
index_file_path='output.idx',
)
# adding entries to the new index
writer.add_entry('some short string')
writer.add_entry('another but now a longer string')
writer.add_entry('more text to add')
# adding entries from file lines
writer.add_entries_from_file_lines('input_file.txt')
# making sure the data is dumped to the file
writer.finalize()
```
Search a substring within an index
```python
import pysubstringsearch
# opening an index file for searching
reader = pysubstringsearch.Reader(
index_file_path='output.idx',
)
# lookup for a substring
reader.search('short')
>>> ['some short string']
# lookup for a substring
reader.search('string')
>>> ['some short string', 'another but now a longer string']
# lookup for multiple substrings
reader.search_multiple(
[
'short',
'longer',
],
)
>>> ['some short string', 'another but now a longer string']
```
## License
Distributed under the MIT License. See `LICENSE` for more information.
## Contact
Gal Ben David - gal@intsights.com
Project Link: [https://github.com/Intsights/PySubstringSearch](https://github.com/Intsights/PySubstringSearch)
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"description": "<p align=\"center\">\n <a href=\"https://github.com/Intsights/PySubstringSearch\">\n <img src=\"https://raw.githubusercontent.com/Intsights/PySubstringSearch/master/images/logo.png\" alt=\"Logo\">\n </a>\n <h3 align=\"center\">\n A Python library written in Rust that searches for substrings quickly using a Suffix Array\n </h3>\n</p>\n\n\n\n\n[](https://pypi.org/project/PySubstringSearch/)\n\n## Table of Contents\n\n- [Table of Contents](#table-of-contents)\n- [About The Project](#about-the-project)\n - [Built With](#built-with)\n - [Performance](#performance)\n - [500MB File](#500mb-file)\n - [7500MB File](#7500mb-file)\n - [Installation](#installation)\n- [Usage](#usage)\n- [License](#license)\n- [Contact](#contact)\n\n\n## About The Project\n\nPySubstringSearch is a library designed to search over an index file for substring patterns. In order to achieve speed and efficiency, the library is written in Rust. For string indexing, the library uses [libsais](https://github.com/IlyaGrebnov/libsais) suffix array construction library. The index created consists of the original text and a 32bit suffix array struct. To get around the limitations of the Suffix Array Construction implementation, the library uses a proprietary container protocol to hold the original text and index in chunks of 512MB.\n\nThe module implements a method for searching.\n- `search` - Find different entries with the same substring concurrently. Concurrency increases as the index file grows in size with multiple inner chunks.\n- `search_multiple` - same as `search` but accepts multiple substrings in a single call\n\n\n### Built With\n\n* [libsais](https://github.com/IlyaGrebnov/libsais)\n\n\n### Performance\n\n#### 500MB File\n| Library | Function | Time | #Results | Improvement Factor |\n| ------------- | ------------- | ------------- | ------------- | ------------- |\n| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('google', '500mb').run().as_string.split('\\n') | 47.2ms | 5943 | 1.0x |\n| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('google') | 497\u00b5s | 5943 | 95x |\n| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('text_two', '500mb').run().as_string.split('\\n') | 44.7ms | 159 | 1.0x |\n| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('text_two') | 14.9\u00b5s | 159 | 3000x |\n\n#### 7500MB File\n| Library | Function | Time | #Results | Improvement Factor |\n| ------------- | ------------- | ------------- | ------------- | ------------- |\n| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('google', '6000mb').run().as_string.split('\\n') | 900ms | 62834 | 1.0x |\n| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('google') | 10.1ms | 62834 | 89.1x |\n| [ripgrepy](https://pypi.org/project/ripgrepy/) | Ripgrepy('text_two', '6000mb').run().as_string.split('\\n') | 820ms | 0 | 1.0x |\n| [PySubstringSearch](https://github.com/Intsights/PySubstringSearch) | reader.search('text_two') | 200\u00b5s | 0 | 4100x |\n\n\n### Installation\n\n```sh\npip3 install PySubstringSearch\n```\n\n\n## Usage\n\nCreate an index\n```python\nimport pysubstringsearch\n\n# creating a new index file\n# if a file with this name is already exists, it will be overwritten\nwriter = pysubstringsearch.Writer(\n index_file_path='output.idx',\n)\n\n# adding entries to the new index\nwriter.add_entry('some short string')\nwriter.add_entry('another but now a longer string')\nwriter.add_entry('more text to add')\n\n# adding entries from file lines\nwriter.add_entries_from_file_lines('input_file.txt')\n\n# making sure the data is dumped to the file\nwriter.finalize()\n```\n\nSearch a substring within an index\n```python\nimport pysubstringsearch\n\n# opening an index file for searching\nreader = pysubstringsearch.Reader(\n index_file_path='output.idx',\n)\n\n# lookup for a substring\nreader.search('short')\n>>> ['some short string']\n\n# lookup for a substring\nreader.search('string')\n>>> ['some short string', 'another but now a longer string']\n\n# lookup for multiple substrings\nreader.search_multiple(\n [\n 'short',\n 'longer',\n ],\n)\n>>> ['some short string', 'another but now a longer string']\n```\n\n\n\n## License\n\nDistributed under the MIT License. See `LICENSE` for more information.\n\n\n## Contact\n\nGal Ben David - gal@intsights.com\n\nProject Link: [https://github.com/Intsights/PySubstringSearch](https://github.com/Intsights/PySubstringSearch)\n\n",
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