pytrim2


Namepytrim2 JSON
Version 0.0.5 PyPI version JSON
download
home_pagehttps://github.com/hcstubbe/pytrim2
SummaryA python program to trim and demultiplex nanopore reads
upload_time2023-06-14 01:49:40
maintainer
docs_urlNone
authorhcstubbe
requires_python>=3.7
licenseApache Software License 2.0
keywords nbdev jupyter notebook python
VCS
bugtrack_url
requirements No requirements were recorded.
Travis-CI No Travis.
coveralls test coverage No coveralls.
            pytrim2
================

<!-- WARNING: THIS FILE WAS AUTOGENERATED! DO NOT EDIT! -->

## Install

``` sh
pip install pytrim2
```

## How to use

``` python
from pytrim2.demultiplex import demultiplex

demultiplex("test_data/test.fasta",
            "fasta",
            "test_data/test_primer.fasta",
            "fasta",
            "test_data/test_out",
            200,
            5)
```

            

Raw data

            {
    "_id": null,
    "home_page": "https://github.com/hcstubbe/pytrim2",
    "name": "pytrim2",
    "maintainer": "",
    "docs_url": null,
    "requires_python": ">=3.7",
    "maintainer_email": "",
    "keywords": "nbdev jupyter notebook python",
    "author": "hcstubbe",
    "author_email": "hstubbe@med.lmu.de",
    "download_url": "https://files.pythonhosted.org/packages/c9/05/d1fcfe6d2e4e25be0770e3739cca437c491677762f574f9cf356a696ce8e/pytrim2-0.0.5.tar.gz",
    "platform": null,
    "description": "pytrim2\n================\n\n<!-- WARNING: THIS FILE WAS AUTOGENERATED! DO NOT EDIT! -->\n\n## Install\n\n``` sh\npip install pytrim2\n```\n\n## How to use\n\n``` python\nfrom pytrim2.demultiplex import demultiplex\n\ndemultiplex(\"test_data/test.fasta\",\n            \"fasta\",\n            \"test_data/test_primer.fasta\",\n            \"fasta\",\n            \"test_data/test_out\",\n            200,\n            5)\n```\n",
    "bugtrack_url": null,
    "license": "Apache Software License 2.0",
    "summary": "A python program to trim and demultiplex nanopore reads",
    "version": "0.0.5",
    "project_urls": {
        "Homepage": "https://github.com/hcstubbe/pytrim2"
    },
    "split_keywords": [
        "nbdev",
        "jupyter",
        "notebook",
        "python"
    ],
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "d34cf4b157918f1c670f0bd10e447b1bf2e78021ff25b8e3d933920bf43b6aae",
                "md5": "c4e3a57235ef2ac180a9eb6fce930947",
                "sha256": "e9e835f5c6fe369efbb6fa13c83f43461d5d1eb59ac28a954d79073cb62939e9"
            },
            "downloads": -1,
            "filename": "pytrim2-0.0.5-py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "c4e3a57235ef2ac180a9eb6fce930947",
            "packagetype": "bdist_wheel",
            "python_version": "py3",
            "requires_python": ">=3.7",
            "size": 8043,
            "upload_time": "2023-06-14T01:49:38",
            "upload_time_iso_8601": "2023-06-14T01:49:38.728304Z",
            "url": "https://files.pythonhosted.org/packages/d3/4c/f4b157918f1c670f0bd10e447b1bf2e78021ff25b8e3d933920bf43b6aae/pytrim2-0.0.5-py3-none-any.whl",
            "yanked": false,
            "yanked_reason": null
        },
        {
            "comment_text": "",
            "digests": {
                "blake2b_256": "c905d1fcfe6d2e4e25be0770e3739cca437c491677762f574f9cf356a696ce8e",
                "md5": "7a798f80e314dc71eaf2537a089d3fec",
                "sha256": "e1833946be9aaf52904cb5e7f2905589c64dff8b8e9be431ca748c27edd82dd0"
            },
            "downloads": -1,
            "filename": "pytrim2-0.0.5.tar.gz",
            "has_sig": false,
            "md5_digest": "7a798f80e314dc71eaf2537a089d3fec",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": ">=3.7",
            "size": 8614,
            "upload_time": "2023-06-14T01:49:40",
            "upload_time_iso_8601": "2023-06-14T01:49:40.364623Z",
            "url": "https://files.pythonhosted.org/packages/c9/05/d1fcfe6d2e4e25be0770e3739cca437c491677762f574f9cf356a696ce8e/pytrim2-0.0.5.tar.gz",
            "yanked": false,
            "yanked_reason": null
        }
    ],
    "upload_time": "2023-06-14 01:49:40",
    "github": true,
    "gitlab": false,
    "bitbucket": false,
    "codeberg": false,
    "github_user": "hcstubbe",
    "github_project": "pytrim2",
    "travis_ci": false,
    "coveralls": false,
    "github_actions": true,
    "lcname": "pytrim2"
}
        
Elapsed time: 0.15784s