ql


Nameql JSON
Version 2.4.5 PyPI version JSON
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Summaryspin.systems generator and driver
upload_time2024-05-06 18:42:59
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requires_python<3.13,>=3.10
licenseMIT
keywords website staticjinja
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            # quill

[![PyPI](https://img.shields.io/pypi/v/ql?logo=python&logoColor=%23cccccc)](https://pypi.org/project/ql)
[![pdm-managed](https://img.shields.io/badge/pdm-managed-blueviolet)](https://pdm.fming.dev)
[![pre-commit.ci status](https://results.pre-commit.ci/badge/github/spin-systems/quill/master.svg)](https://results.pre-commit.ci/latest/github/spin-systems/quill/master)
[![Supported Python versions](https://img.shields.io/pypi/pyversions/ql.svg)](https://pypi.org/project/ql)

quill is the "driver" for [spin.systems](https://spin.systems),
and packaged on PyPi as [ql](https://pypi.org/project/ql/).

A more detailed description of the package namespace can be found below,
but for everyday usage the commands needed are:

```py
import quill as ql
ql.ssm.check_manifest() # Check all component repos' status
ql.ssm.repos_df # print the summary dataframe
ql.fold.wire.standup() # build or rebuild any 'wire' module MMD documents as HTML pages
ql.fold.cut.standup() # build or rebuild any 'cut' module Jinja templates as HTML pages
ql.remote_push_manifest() # Add/commit/push any dirty repos, triggering CI build
```

The last step will also rebuild any sites which have dirty repos (to avoid content partially falling behind,
when for instance the templates for a site are changed).

## Structure

- `ql`⠶`scan`: Read `.mmd` files
  - `scan`⠶`lever`: Parse `.mmd` file format
- `ql`⠶`manifest`: Read `spin.systems` configuration
- `ql`⠶`fold`: Manage `*.spin.systems` subdomains
  - `fold`⠶`address`: Manage subdomain address shorthand
  - `fold`⠶`wire`: Emit HTML websites from `.mmd` files
  - `fold`⠶`cut`: Emit HTML websites from `.html` Jinja templates and `.md` files

## Helper CLI

> Note: for reasons unknown, the `defopt` CLI only works on 3.10+

Installation adds a `ql` command (for deployment) and `cyl` (for local preview).
These two commands handle repo-internal and -external output of generated sites respectively
(`cyl` currently only for the `fold.cut` module, not `fold.wire`,
so not yet sufficient to replace in the CI pipeline).

```
usage: ql [-h] [-d [DOMAINS_LIST ...]] [--incremental] [-n] [-r] [-w] [-v]
          [-g] [--internal | --no-internal] [--version]

Configure input filtering and output display.

options:
  -h, --help            show this help message and exit
  -d [DOMAINS_LIST ...], --domains-list [DOMAINS_LIST ...]
                        Names of the subdomains to build.
                        (default: None)
  --incremental         compute MD5 checksums for each of the generated files.
                        (default: False)
  -n, --no-render       Dry run mode.
                        (default: False)
  -r, --recheck         Only regenerate files whose input checksum has changed since the last
                        incremental run.
                        (default: False)
  -w, --watch           Rebuild the domains continuously (incompatible with incremental/recheck).
                        (default: False)
  -v, --verbose         Whether to announce what tasks are being carried out.
                        (default: False)
  -g, --gitlab-ci       Source the manifest repos (i.e. git pull them) and then stash
                        the changes after building, switch to the www branch, pop the
                        stash and push the changes (i.e. publish the website content).
                        (default: False)
  --internal, --no-internal
                        Whether to build sites internal (ql) or external (cyl,
                        not including 'fold.wire') to the repo.
                        (default: True)
  --version             show program's version number and exit
```

So for example:

```sh
cyl -d pore
```

Populates `~/spin/cyl/pore` with the `cut` module's portion of _pore.spin.systems_

### Incremental builds, rechecking, and watching

Towards the goal of implementing an incremental build system on CI, quill has 2 extra modes:

- an _incremental_ build mode: where in addition to building the entire site (or domain list),
  MD5 checksums are computed for each of the generated files. In this mode, the _build auditer_ is activated,
  and stores a log as it generates the templates. Use the `-i` flag when you want to recreate the
  inventory of template MD5 hashes.

To run a build for the same domain as above, in incremental mode, run:

```sh
cyl -d pore -i
```

- a _recheck_ build mode: a subset of incremental builds in which only files whose input checksum
  has changed since the last incremental run are regenerated. This makes the build substantially faster
  as there is a reduced scope of templates to transform. Use the `-r` flag (alongside `-i`) when you
  want to double check only the files in the template hash inventory and only regenerate what differs on disk.

To run a recheck afterwards, and only build any files that changed in between builds, run:

```sh
cyl -d pore -i -r
```

- a _watch_ build mode: incompatible with incremental/recheck, this is for continuously rebuilding
  (incremental mode is designed for repeated use, like on an incremental build system). Use the `-w`
  flag when you want to have the page rebuild automatically in the background.

Watching is incompatible with incremental mode, but rebuilds following changes to a file.

The corresponding command to the ones above would be:

```sh
cyl -d pore -w
```

## Usage memo

- Requires directory of static site repositories at
  location specified in [`spin.ini`](spin.ini) (by default
  this is as a sibling directory `../ss/`), containing
  a file `manifest.mmd` beginning with the apex domain and
  immediately followed by a subdomain list.

Below is a demo of accessing the `spin.systems` manifest file
(`ssm`) which implements the `MMD` class, subclassing `Doc`,
which parses the file contents in a structured way (specifically,
as a list of colon-separated values).

```py
>>> from pprint import pprint
>>> from quill import ssm
>>> import pandas as pd
>>> ssm
Parsed MMD file (Document of 1 block, containing 1 list)
>>> ssm.list
Headered list with 16 items
>>> pprint(ssm.list.all_nodes)
[-spin.systems:spin-systems:master www:,
 -:cal:qu-cal:master www,
 -,:log:spin-log:master www,
 -,:conf:qu-conf:master www,
 -,:pore:qu-pore:master www,
 -,:ocu:naiveoculus:master www,
 -,:arc:appendens:master www,
 -,:qrx:qu-arx:master www,
 -,:erg:spin-erg:master www,
 -,:opt:spin-opt:master www,
 -,:poll:qu-poll:master www,
 -,:arb:spin-arb:master www,
 -,:reed:qu-reed:master www,
 -,:noto:qu-noto:master www,
 -,:plot:qu-plot:master www,
 -,:doc:spin-doc:master www,
 -,:labs:qu-labs:master www]
```

Similarly `ssm.list.nodes` gives just the subdomains, and `ssm.list.header` gives the main site
domain.

```py
>>> ssm.list.header
-spin.systems:spin-systems:
>>> ssm.list.header.parts
['spin.systems', 'spin-systems', 'master www']
>>> ssm.list.nodes[0].parts
['cal', 'qu-cal', 'master www']
>>> ssm.list.nodes[1].parts
['log', 'spin-log', 'master www']
>>> ssm.list.nodes[2].parts
['conf', 'qu-conf', 'master www']
>>> pprint(ssm.all_parts)
[['spin.systems', 'spin-systems', 'master www'],
 ['cal', 'qu-cal', 'master www'],
 ['log', 'spin-log', 'master www'],
 ['conf', 'qu-conf', 'master www'],
 ['pore', 'qu-pore', 'master www'],
 ['ocu', 'naiveoculus', 'master www'],
 ['arc', 'appendens', 'master www'],
 ['qrx', 'qu-arx', 'master www'],
 ['erg', 'spin-erg', 'master www'],
 ['opt', 'spin-opt', 'master www'],
 ['poll', 'qu-poll', 'master www'],
 ['arb', 'spin-arb', 'master www'],
 ['reed', 'qu-reed', 'master www'],
 ['noto', 'qu-noto', 'master www'],
 ['plot', 'qu-plot', 'master www'],
 ['doc', 'spin-doc', 'master www'],
 ['labs', 'qu-labs', 'master www']]
>>> ssm.as_df()
          domain     repo_name    branches
0   spin.systems  spin-systems  master www
1            cal        qu-cal  master www
2            log      spin-log  master www
3           conf       qu-conf  master www
4           pore       qu-pore  master www
5            ocu   naiveoculus  master www
6            arc     appendens  master www
7            qrx        qu-arx  master www
8            erg      spin-erg  master www
9            opt      spin-opt  master www
10          poll       qu-poll  master www
11           arb      spin-arb  master www
12          reed       qu-reed  master www
13          noto       qu-noto  master www
14          plot       qu-plot  master www
15           doc      spin-doc  master www
16          labs       qu-labs  master www
```

This is just for review purposes currently, and any further info can be added as long
as all the lines ("nodes") have the same number of colon-separated values.

The manifest is parsed in [`manifest`⠶`parsing`](src/quill/manifest/parsing.py) by
`parse_man_node` which is wrapped into `ssm.repos`,
which will print out the repos' git addresses for each CNAME domain or subdomain:

```STDOUT
('spin.systems', 'git@gitlab.com:spin-systems/spin-systems.gitlab.io.git')
('cal', 'git@gitlab.com:qu-cal/qu-cal.gitlab.io.git')
('log', 'git@gitlab.com:spin-log/spin-log.gitlab.io.git')
('conf', 'git@gitlab.com:qu-conf/qu-conf.gitlab.io.git')
('pore', 'git@gitlab.com:qu-pore/qu-pore.gitlab.io.git')
('ocu', 'git@gitlab.com:naiveoculus/naiveoculus.gitlab.io.git')
('arc', 'git@gitlab.com:appendens/appendens.gitlab.io.git')
('qrx', 'git@gitlab.com:qu-arx/qu-arx.gitlab.io.git')
('erg', 'git@gitlab.com:spin-erg/spin-erg.gitlab.io.git')
('opt', 'git@gitlab.com:spin-opt/spin-opt.gitlab.io.git')
('poll', 'git@gitlab.com:qu-poll/qu-poll.gitlab.io.git')
('arb', 'git@gitlab.com:spin-arb/spin-arb.gitlab.io.git')
('reed', 'git@gitlab.com:qu-reed/qu-reed.gitlab.io.git')
('noto', 'git@gitlab.com:qu-noto/qu-noto.gitlab.io.git')
('plot', 'git@gitlab.com:qu-plot/qu-plot.gitlab.io.git')
('doc', 'git@gitlab.com:spin-doc/spin-doc.gitlab.io.git')
('labs', 'git@gitlab.com:qu-labs/qu-labs.gitlab.io.git')
```

as well as a DataFrame which is modified by the `ql.ssm.check_manifest()` to include 'live' views on
the repos (note that this method takes a `add_before_check=True` argument, which controls whether
`git add --all` is run on each repo to check if it's 'dirty').

```py
>>> ssm.repos_df
          domain     repo_name    branches                                                 git_url
0   spin.systems  spin-systems  master www  git@gitlab.com:spin-systems/spin-systems.gitlab.io.git
1            cal        qu-cal  master www              git@gitlab.com:qu-cal/qu-cal.gitlab.io.git
2            log      spin-log  master www          git@gitlab.com:spin-log/spin-log.gitlab.io.git
3           conf       qu-conf  master www            git@gitlab.com:qu-conf/qu-conf.gitlab.io.git
4           pore       qu-pore  master www            git@gitlab.com:qu-pore/qu-pore.gitlab.io.git
5            ocu   naiveoculus  master www    git@gitlab.com:naiveoculus/naiveoculus.gitlab.io.git
6            arc     appendens  master www        git@gitlab.com:appendens/appendens.gitlab.io.git
7            qrx        qu-arx  master www              git@gitlab.com:qu-arx/qu-arx.gitlab.io.git
8            erg      spin-erg  master www          git@gitlab.com:spin-erg/spin-erg.gitlab.io.git
9            opt      spin-opt  master www          git@gitlab.com:spin-opt/spin-opt.gitlab.io.git
10          poll       qu-poll  master www            git@gitlab.com:qu-poll/qu-poll.gitlab.io.git
11           arb      spin-arb  master www          git@gitlab.com:spin-arb/spin-arb.gitlab.io.git
12          reed       qu-reed  master www            git@gitlab.com:qu-reed/qu-reed.gitlab.io.git
13          noto       qu-noto  master www            git@gitlab.com:qu-noto/qu-noto.gitlab.io.git
14          plot       qu-plot  master www            git@gitlab.com:qu-plot/qu-plot.gitlab.io.git
15           doc      spin-doc  master www          git@gitlab.com:spin-doc/spin-doc.gitlab.io.git
16          labs       qu-labs  master www            git@gitlab.com:qu-labs/qu-labs.gitlab.io.git
>>> ssm.check_manifest()
          domain     repo_name    branches                                                 git_url  branch  local  clean
0   spin.systems  spin-systems  master www  git@gitlab.com:spin-systems/spin-systems.gitlab.io.git     www   True   True
1            cal        qu-cal  master www              git@gitlab.com:qu-cal/qu-cal.gitlab.io.git     www   True   True
2            log      spin-log  master www          git@gitlab.com:spin-log/spin-log.gitlab.io.git     www   True   True
3           conf       qu-conf  master www            git@gitlab.com:qu-conf/qu-conf.gitlab.io.git     www   True   True
4           pore       qu-pore  master www            git@gitlab.com:qu-pore/qu-pore.gitlab.io.git     www   True   True
5            ocu   naiveoculus  master www    git@gitlab.com:naiveoculus/naiveoculus.gitlab.io.git     www   True   True
6            arc     appendens  master www        git@gitlab.com:appendens/appendens.gitlab.io.git     www   True   True
7            qrx        qu-arx  master www              git@gitlab.com:qu-arx/qu-arx.gitlab.io.git     www   True   True
8            erg      spin-erg  master www          git@gitlab.com:spin-erg/spin-erg.gitlab.io.git     www   True   True
9            opt      spin-opt  master www          git@gitlab.com:spin-opt/spin-opt.gitlab.io.git     www   True   True
10          poll       qu-poll  master www            git@gitlab.com:qu-poll/qu-poll.gitlab.io.git  master   True   True
11           arb      spin-arb  master www          git@gitlab.com:spin-arb/spin-arb.gitlab.io.git     www   True   True
12          reed       qu-reed  master www            git@gitlab.com:qu-reed/qu-reed.gitlab.io.git     www   True   True
13          noto       qu-noto  master www            git@gitlab.com:qu-noto/qu-noto.gitlab.io.git     www   True   True
14          plot       qu-plot  master www            git@gitlab.com:qu-plot/qu-plot.gitlab.io.git     www   True   True
15           doc      spin-doc  master www          git@gitlab.com:spin-doc/spin-doc.gitlab.io.git     www   True   True
16          labs       qu-labs  master www            git@gitlab.com:qu-labs/qu-labs.gitlab.io.git     www   True   True
```

In this example, the `poll` repo is on the master branch, and the rest are on the www (web deploy) branch.

Obviously this can then be used to clone the repositories locally
(or address them for any other `git`-related task)

- One nice feature of GitLab (which at the time of writing GitHub doesn't
  provide to my knowledge) is that these repos can all be private, and only
  the static site will be hosted publicly (specified in 'Settings' > 'General')

To clone a given repo (testing has all been with SSH URLs), there is the `ql.clone()` function,
and subsequently the namespace can be `refresh`ed to reflect the new addition (this is
done automatically within the `clone` function).

```py
>>> ql.ns
{}
>>> ql.clone(ql.ssm.repos_df.git_url[0], "spin.systems")
Cloning into 'spin.systems'...
remote: Enumerating objects: 6, done.
remote: Counting objects: 100% (6/6), done.
remote: Compressing objects: 100% (6/6), done.
remote: Total 236 (delta 1), reused 0 (delta 0), pack-reused 230
Receiving objects: 100% (236/236), 34.16 KiB | 210.00 KiB/s, done.
Resolving deltas: 100% (123/123), done.
>>> ql.ns
{'spin.systems': 'https://gitlab.com/spin-systems/spin-systems.gitlab.io'}
```

Lastly, the entire manifest of repos can be sourced from `ssm` and `clone`d into the
`ns_path` directory. This is done on CI to build each site when a change takes place
in one of the source repos or the quill repo (the 'engine').

```py
ql.source_manifest()
```

For now, if the directory named as the `domain` entry of the row in the `ssm.repos_df`
table exists, it will simply not touch it. If it doesn't exist, it will try to clone it.

Et voila the namespace now contains all the repos (stored in the sibling `ss` directory)

```py
>>> pprint(ql.ns)
{'arb': 'https://gitlab.com/spin-arb/spin-arb.gitlab.io',
 'arc': 'https://gitlab.com/appendens/appendens.gitlab.io',
 'cal': 'https://gitlab.com/qu-cal/qu-cal.gitlab.io',
 'conf': 'https://gitlab.com/qu-conf/qu-conf.gitlab.io',
 'doc': 'https://gitlab.com/spin-doc/spin-doc.gitlab.io',
 'erg': 'https://gitlab.com/spin-erg/spin-erg.gitlab.io',
 'labs': 'https://gitlab.com/qu-labs/qu-labs.gitlab.io',
 'log': 'https://gitlab.com/spin-log/spin-log.gitlab.io',
 'noto': 'https://gitlab.com/qu-noto/qu-noto.gitlab.io',
 'ocu': 'https://gitlab.com/naiveoculus/naiveoculus.gitlab.io',
 'opt': 'https://gitlab.com/spin-opt/spin-opt.gitlab.io',
 'plot': 'https://gitlab.com/qu-plot/qu-plot.gitlab.io',
 'poll': 'https://gitlab.com/qu-poll/qu-poll.gitlab.io',
 'pore': 'https://gitlab.com/qu-pore/qu-pore.gitlab.io',
 'qrx': 'https://gitlab.com/qu-arx/qu-arx.gitlab.io',
 'reed': 'https://gitlab.com/qu-reed/qu-reed.gitlab.io',
 'spin.systems': 'https://gitlab.com/spin-systems/spin-systems.gitlab.io'}
```

At the end of `source_manifest`, the `ssm.repos_df` DataFrame is updated with a column `local`
indicating whether each domain in the manifest is now in the `ns` namespace (i.e. whether a
local repo has been created), via the `check_manifest` method which `ssm`'s `MMD` class inherits
from the `Doc` class.

- This `update_manifest` method will be expanded to supplement the `repos_df` DataFrame with
  other information worth knowing to do with the `git` status of the repo in question, for those
  which are locally available. This ensures no unnecessary computation is done before the extra
  information is needed.

The next thing we can do (having established that these are now cloned locally) is to read the CI YAML
as the 'layout' for each site, checking they're valid (according to the
[reference](https://docs.gitlab.com/ee/ci/yaml/#pages) on YAML configs for GitLab Pages)

```py
>>> manifests = ql.yaml_manifests(as_dicts=False)
>>> for k,m in manifests.items(): print(k, end="\t"); pprint(m)
spin.systems    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
cal     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
log     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
conf    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
pore    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
ocu     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
arc     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
qrx     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
erg     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
opt     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
poll    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
arb     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
reed    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
noto    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
plot    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
doc     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
labs    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}
```

- Obviously these could all be made more elaborate for less trivial scripts, this is a first draft showing basic functionality and to enforce/check standardisation across all repos
- This setup is deliberately brittle, so any changes will need to be validated in the `fold.yaml_util` module,
  and so the library itself incorporates testing (simple `assert` statements based on a clear expected implementation)

The build directory can be set with `change_build_dir`, and using this I set all of the repos to
build from "site" (but this can be changed at a later date):

```py
for d in ql.alias_df.domain: ql.change_build_dir(d, "site")
```
⇣
```STDOUT
Moved build path for log from 'site' --> /home/louis/spin/ss/log/site
Created build path for ocu at /home/louis/spin/ss/ocu/site
Moved build path for arc from 'site' --> /home/louis/spin/ss/arc/site
Created build path for erg at /home/louis/spin/ss/erg/site
Created build path for opt at /home/louis/spin/ss/opt/site
Created build path for arb at /home/louis/spin/ss/arb/site
Created build path for doc at /home/louis/spin/ss/doc/site
Created build path for cal at /home/louis/spin/ss/cal/site
Moved build path for conf from 'docs' --> /home/louis/spin/ss/conf/site
Created build path for pore at /home/louis/spin/ss/pore/site
Created build path for qrx at /home/louis/spin/ss/qrx/site
Created build path for poll at /home/louis/spin/ss/poll/site
Created build path for reed at /home/louis/spin/ss/reed/site
Created build path for noto at /home/louis/spin/ss/noto/site
Created build path for plot at /home/louis/spin/ss/plot/site
Created build path for labs at /home/louis/spin/ss/labs/site
```

To commit these changes, I added some more functions to manage the `git` repos.
`ql.ssm.check_manifest()` now has a column referring to whether the working tree
is clean or has changes to tracked files not staged for commit.

The output will be something like this example (where the README in `arc`
was moved):

```py
ql.remote_push_manifest()
```
⇣
```STDERR
Skipping 'repo_dir=/home/louis/spin/ss/spin.systems' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/cal' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/log' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/conf' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/pore' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/ocu' (working tree clean)
Commit [repo_dir=/home/louis/spin/ss/arc] ⠶ Renamed site/README.md -> README.md
⇢ Pushing ⠶ origin
Skipping 'repo_dir=/home/louis/spin/ss/qrx' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/erg' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/opt' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/poll' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/arb' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/reed' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/noto' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/plot' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/doc' (working tree clean)
Skipping 'repo_dir=/home/louis/spin/ss/labs' (working tree clean)
```

This function takes a `refspec` argument which indicates a particular path to add and push in each repo,
a `specific_domains` argument which can be a string of a single domain, or list of multiple,
and will be evaluated as the list of all domains if left as `None`.

Running `ssm.check_manifest()` again is required to update `ssm.repos_df`.

This `repos_df` dataframe is also useful for comparing whatever
other properties you might want to check, e.g. which have a README

```py
>>> df = ql.ssm.repos_df
>>> df["has_README"] = ["README.md" in [x.name for x in (ql.ns_path / d).iterdir()] for d in df.domain]
>>> df
          domain     repo_name    branches  ... local clean  has_README
0   spin.systems  spin-systems  master www  ...  True  True        True
1            cal        qu-cal  master www  ...  True  True       False
2            log      spin-log  master www  ...  True  True        True
3           conf       qu-conf  master www  ...  True  True        True
4           pore       qu-pore  master www  ...  True  True       False
5            ocu   naiveoculus  master www  ...  True  True        True
6            arc     appendens  master www  ...  True  True        True
7            qrx        qu-arx  master www  ...  True  True       False
8            erg      spin-erg  master www  ...  True  True       False
9            opt      spin-opt  master www  ...  True  True       False
10          poll       qu-poll  master www  ...  True  True       False
11           arb      spin-arb  master www  ...  True  True       False
12          reed       qu-reed  master www  ...  True  True       False
13          noto       qu-noto  master www  ...  True  True       False
14          plot       qu-plot  master www  ...  True  True        True
15           doc      spin-doc  master www  ...  True  True       False
16          labs       qu-labs  master www  ...  True  True       False
```

Obviously this is the kind of thing to then follow up manually,
but it helps to have programmatic ways to view the set of directories.

If after reviewing `ssm.repos_df` you want to push, you can do so
either with an automated commit message or by passing it as the `commit_msg`
argument to `remote_push_manifest` (which will reuse the same commit message
if multiple repos are not clean).

- Note you can always manually go in and check the `git diff` beforehand

## `static`, `src`, and `wire`

To build all sites with a `src` and/or `static` directory, run `ql.fold.cut.standup()`.
This builds templates from the `src` folder with `staticjinja`, and the static files
are just copied over (directly under `site/`).

To build all sites with a wire config, run `ql.fold.wire.standup()`.

<details><summary>More details</summary>

<p>

In fact, `standup` returns a dictionary of the domains, though for now
only one domain is in use with wires.

```py
emitters = ql.fold.wire.standup(verbose=False)
emitters
```
⇣
```STDOUT
{'poll': <quill.fold.wire.emitters.WireEmitter object at 0x7f304980eb20>}
```

</p>

</details>

Then to push the sites 'live', run `ql.remote_push_manifest("Commit message goes here")`.

## Aliases

The "canonical names" displayed in the README are the aliases, which by and large
are the same as the domain names.

These provide the titles of the index pages of each site.

I might make more use of these in future, I originally only needed these
as it turns out the description on GitHub/GitLab isn't stored in the git repo
itself (silly as there's a `description` built in to `git`?)

Using this let me generate a nice README for the spin.systems superrepo:

> # spin.systems
> 
> spin.systems: [`ss`](https://gitlab.com/spin.systems/spin.systems.gitlab.io)
> 
> - `cal`: [q ⠶ cal](https://gitlab.com/qu-cal/qu-cal.gitlab.io)
> - `log`: [∫ ⠶ log](https://gitlab.com/spin-log/spin-log.gitlab.io)
> - `conf`: [q ⠶ conf](https://gitlab.com/qu-conf/qu-conf.gitlab.io)
> - `pore`: [q ⠶ biorx](https://gitlab.com/qu-pore/qu-pore.gitlab.io)
> - `ocu`: [∫ ⠶ ocu](https://gitlab.com/naiveoculus/naiveoculus.gitlab.io)
> - `arc`: [∫ ⠶ app](https://gitlab.com/appendens/appendens.gitlab.io)
> - `qrx`: [q ⠶ arx](https://gitlab.com/qu-arx/qu-arx.gitlab.io)
> - `erg`: [∫ ⠶ erg](https://gitlab.com/spin-erg/spin-erg.gitlab.io)
> - `opt`: [∫ ⠶ opt](https://gitlab.com/spin-opt/spin-opt.gitlab.io)
> - `poll`: [q ⠶ poll](https://gitlab.com/qu-poll/qu-poll.gitlab.io)
> - `arb`: [∫ ⠶ arb](https://gitlab.com/spin-arb/spin-arb.gitlab.io)
> - `reed`: [q ⠶ reed](https://gitlab.com/qu-reed/qu-reed.gitlab.io)
> - `noto`: [q ⠶ ruinoto](https://gitlab.com/qu-noto/qu-noto.gitlab.io)
> - `plot`: [q ⠶ plotspot](https://gitlab.com/qu-plot/qu-plot.gitlab.io)
> - `doc`: [∫ ⠶ doc](https://gitlab.com/spin-doc/spin-doc.gitlab.io)
> - `labs`: [q ⠶ labs](https://gitlab.com/qu-labs/qu-labs.gitlab.io)

## Addresses

"Spin addresses" follow the above "{namespace}⠶{domain|alias}" format, and additionally:

- Some (initially only `∫⠶log`) subdomain repos are 'deploy' stage counterparts
  to local 'dev' stage directories.
- Some (initially only `∫⠶log`) subdomain repos will be 'addressed' with a date
  [and a zero-based counter for same-day entries]

```py
>>> example = "∫⠶log⠶20⠶oct⠶25⠶0"
>>> eg_addr = ql.AddressPath(example)
>>> eg_addr
['∫', 'log', '20', 'oct', '25', '0']
```

The path has been parsed ("strictly" by default) into parts which are
'typed' strings.

```py
pprint(list(map(type, eg_addr)))
```
⇣
```STDOUT
[<class 'ql.src.quill.scan.address.paths.NameSpaceString'>,
 <class 'ql.src.quill.scan.address.paths.DomainString'>,
 <class 'ql.src.quill.scan.address.paths.YyDigitString'>,
 <class 'ql.src.quill.scan.address.paths.mmmString'>,
 <class 'ql.src.quill.scan.address.paths.DdDigitString'>,
 <class 'ql.src.quill.scan.address.paths.FileIntString'>]
```

A file path can be obtained from this using `interpret_filepath`,
which is bound to the class as the `filepath` property:

```py
>>> eg_addr.filepath
PosixPath('/home/louis/spin/l/20/10oct/25/0_digitalising_spin_addresses.mmd')
>>> eg_addr.filepath.exists()
True
>>> ql.mmd(eg_addr.filepath)
Parsed MMD file (Document of 4 blocks)
```

This comes in handy when building components of the spin.systems site such as
[`tap`](https://github.com/lmmx/tap) which can then build parts for a particular domain
with

```py
>>> eg_addr = ql.AddressPath.from_parts(domain="poll", ymd=(2021, 2, 17))
>>> eg_addr.filepath
PosixPath('/home/louis/spin/ss/poll/transmission/21/02feb/17')
```

This gives a simple date-based interface obeying the storage structure of quill,
though unlike files, paths to directories in this way may not exist
(instead they can be created as needed).

## TODO

- [x] A next step could be a class representing the state of the websites [beyond CI], which can
  then be cross-referenced against the `repos_df` (but the goal is not to entirely Python-ise
  the site development, just the management of key aspects to do with the version control on disk)
- [x] Make a pip installable binary wheel (bdist not currently working with SCM, just sdist)
- [x] Make package capable of downloading missing data files in the event it is being distributed

            

Raw data

            {
    "_id": null,
    "home_page": null,
    "name": "ql",
    "maintainer": null,
    "docs_url": null,
    "requires_python": "<3.13,>=3.10",
    "maintainer_email": null,
    "keywords": "website, staticjinja",
    "author": null,
    "author_email": "Louis Maddox <louismmx@gmail.com>",
    "download_url": "https://files.pythonhosted.org/packages/42/4c/97827c97391e40ec5ba78cae0d812c591fde8215e82c5a6955f6eeb3da10/ql-2.4.5.tar.gz",
    "platform": null,
    "description": "# quill\n\n[![PyPI](https://img.shields.io/pypi/v/ql?logo=python&logoColor=%23cccccc)](https://pypi.org/project/ql)\n[![pdm-managed](https://img.shields.io/badge/pdm-managed-blueviolet)](https://pdm.fming.dev)\n[![pre-commit.ci status](https://results.pre-commit.ci/badge/github/spin-systems/quill/master.svg)](https://results.pre-commit.ci/latest/github/spin-systems/quill/master)\n[![Supported Python versions](https://img.shields.io/pypi/pyversions/ql.svg)](https://pypi.org/project/ql)\n\nquill is the \"driver\" for [spin.systems](https://spin.systems),\nand packaged on PyPi as [ql](https://pypi.org/project/ql/).\n\nA more detailed description of the package namespace can be found below,\nbut for everyday usage the commands needed are:\n\n```py\nimport quill as ql\nql.ssm.check_manifest() # Check all component repos' status\nql.ssm.repos_df # print the summary dataframe\nql.fold.wire.standup() # build or rebuild any 'wire' module MMD documents as HTML pages\nql.fold.cut.standup() # build or rebuild any 'cut' module Jinja templates as HTML pages\nql.remote_push_manifest() # Add/commit/push any dirty repos, triggering CI build\n```\n\nThe last step will also rebuild any sites which have dirty repos (to avoid content partially falling behind,\nwhen for instance the templates for a site are changed).\n\n## Structure\n\n- `ql`\u2836`scan`: Read `.mmd` files\n  - `scan`\u2836`lever`: Parse `.mmd` file format\n- `ql`\u2836`manifest`: Read `spin.systems` configuration\n- `ql`\u2836`fold`: Manage `*.spin.systems` subdomains\n  - `fold`\u2836`address`: Manage subdomain address shorthand\n  - `fold`\u2836`wire`: Emit HTML websites from `.mmd` files\n  - `fold`\u2836`cut`: Emit HTML websites from `.html` Jinja templates and `.md` files\n\n## Helper CLI\n\n> Note: for reasons unknown, the `defopt` CLI only works on 3.10+\n\nInstallation adds a `ql` command (for deployment) and `cyl` (for local preview).\nThese two commands handle repo-internal and -external output of generated sites respectively\n(`cyl` currently only for the `fold.cut` module, not `fold.wire`,\nso not yet sufficient to replace in the CI pipeline).\n\n```\nusage: ql [-h] [-d [DOMAINS_LIST ...]] [--incremental] [-n] [-r] [-w] [-v]\n          [-g] [--internal | --no-internal] [--version]\n\nConfigure input filtering and output display.\n\noptions:\n  -h, --help            show this help message and exit\n  -d [DOMAINS_LIST ...], --domains-list [DOMAINS_LIST ...]\n                        Names of the subdomains to build.\n                        (default: None)\n  --incremental         compute MD5 checksums for each of the generated files.\n                        (default: False)\n  -n, --no-render       Dry run mode.\n                        (default: False)\n  -r, --recheck         Only regenerate files whose input checksum has changed since the last\n                        incremental run.\n                        (default: False)\n  -w, --watch           Rebuild the domains continuously (incompatible with incremental/recheck).\n                        (default: False)\n  -v, --verbose         Whether to announce what tasks are being carried out.\n                        (default: False)\n  -g, --gitlab-ci       Source the manifest repos (i.e. git pull them) and then stash\n                        the changes after building, switch to the www branch, pop the\n                        stash and push the changes (i.e. publish the website content).\n                        (default: False)\n  --internal, --no-internal\n                        Whether to build sites internal (ql) or external (cyl,\n                        not including 'fold.wire') to the repo.\n                        (default: True)\n  --version             show program's version number and exit\n```\n\nSo for example:\n\n```sh\ncyl -d pore\n```\n\nPopulates `~/spin/cyl/pore` with the `cut` module's portion of _pore.spin.systems_\n\n### Incremental builds, rechecking, and watching\n\nTowards the goal of implementing an incremental build system on CI, quill has 2 extra modes:\n\n- an _incremental_ build mode: where in addition to building the entire site (or domain list),\n  MD5 checksums are computed for each of the generated files. In this mode, the _build auditer_ is activated,\n  and stores a log as it generates the templates. Use the `-i` flag when you want to recreate the\n  inventory of template MD5 hashes.\n\nTo run a build for the same domain as above, in incremental mode, run:\n\n```sh\ncyl -d pore -i\n```\n\n- a _recheck_ build mode: a subset of incremental builds in which only files whose input checksum\n  has changed since the last incremental run are regenerated. This makes the build substantially faster\n  as there is a reduced scope of templates to transform. Use the `-r` flag (alongside `-i`) when you\n  want to double check only the files in the template hash inventory and only regenerate what differs on disk.\n\nTo run a recheck afterwards, and only build any files that changed in between builds, run:\n\n```sh\ncyl -d pore -i -r\n```\n\n- a _watch_ build mode: incompatible with incremental/recheck, this is for continuously rebuilding\n  (incremental mode is designed for repeated use, like on an incremental build system). Use the `-w`\n  flag when you want to have the page rebuild automatically in the background.\n\nWatching is incompatible with incremental mode, but rebuilds following changes to a file.\n\nThe corresponding command to the ones above would be:\n\n```sh\ncyl -d pore -w\n```\n\n## Usage memo\n\n- Requires directory of static site repositories at\n  location specified in [`spin.ini`](spin.ini) (by default\n  this is as a sibling directory `../ss/`), containing\n  a file `manifest.mmd` beginning with the apex domain and\n  immediately followed by a subdomain list.\n\nBelow is a demo of accessing the `spin.systems` manifest file\n(`ssm`) which implements the `MMD` class, subclassing `Doc`,\nwhich parses the file contents in a structured way (specifically,\nas a list of colon-separated values).\n\n```py\n>>> from pprint import pprint\n>>> from quill import ssm\n>>> import pandas as pd\n>>> ssm\nParsed MMD file (Document of 1 block, containing 1 list)\n>>> ssm.list\nHeadered list with 16 items\n>>> pprint(ssm.list.all_nodes)\n[-spin.systems:spin-systems:master www:,\n -:cal:qu-cal:master www,\n -,:log:spin-log:master www,\n -,:conf:qu-conf:master www,\n -,:pore:qu-pore:master www,\n -,:ocu:naiveoculus:master www,\n -,:arc:appendens:master www,\n -,:qrx:qu-arx:master www,\n -,:erg:spin-erg:master www,\n -,:opt:spin-opt:master www,\n -,:poll:qu-poll:master www,\n -,:arb:spin-arb:master www,\n -,:reed:qu-reed:master www,\n -,:noto:qu-noto:master www,\n -,:plot:qu-plot:master www,\n -,:doc:spin-doc:master www,\n -,:labs:qu-labs:master www]\n```\n\nSimilarly `ssm.list.nodes` gives just the subdomains, and `ssm.list.header` gives the main site\ndomain.\n\n```py\n>>> ssm.list.header\n-spin.systems:spin-systems:\n>>> ssm.list.header.parts\n['spin.systems', 'spin-systems', 'master www']\n>>> ssm.list.nodes[0].parts\n['cal', 'qu-cal', 'master www']\n>>> ssm.list.nodes[1].parts\n['log', 'spin-log', 'master www']\n>>> ssm.list.nodes[2].parts\n['conf', 'qu-conf', 'master www']\n>>> pprint(ssm.all_parts)\n[['spin.systems', 'spin-systems', 'master www'],\n ['cal', 'qu-cal', 'master www'],\n ['log', 'spin-log', 'master www'],\n ['conf', 'qu-conf', 'master www'],\n ['pore', 'qu-pore', 'master www'],\n ['ocu', 'naiveoculus', 'master www'],\n ['arc', 'appendens', 'master www'],\n ['qrx', 'qu-arx', 'master www'],\n ['erg', 'spin-erg', 'master www'],\n ['opt', 'spin-opt', 'master www'],\n ['poll', 'qu-poll', 'master www'],\n ['arb', 'spin-arb', 'master www'],\n ['reed', 'qu-reed', 'master www'],\n ['noto', 'qu-noto', 'master www'],\n ['plot', 'qu-plot', 'master www'],\n ['doc', 'spin-doc', 'master www'],\n ['labs', 'qu-labs', 'master www']]\n>>> ssm.as_df()\n          domain     repo_name    branches\n0   spin.systems  spin-systems  master www\n1            cal        qu-cal  master www\n2            log      spin-log  master www\n3           conf       qu-conf  master www\n4           pore       qu-pore  master www\n5            ocu   naiveoculus  master www\n6            arc     appendens  master www\n7            qrx        qu-arx  master www\n8            erg      spin-erg  master www\n9            opt      spin-opt  master www\n10          poll       qu-poll  master www\n11           arb      spin-arb  master www\n12          reed       qu-reed  master www\n13          noto       qu-noto  master www\n14          plot       qu-plot  master www\n15           doc      spin-doc  master www\n16          labs       qu-labs  master www\n```\n\nThis is just for review purposes currently, and any further info can be added as long\nas all the lines (\"nodes\") have the same number of colon-separated values.\n\nThe manifest is parsed in [`manifest`\u2836`parsing`](src/quill/manifest/parsing.py) by\n`parse_man_node` which is wrapped into `ssm.repos`,\nwhich will print out the repos' git addresses for each CNAME domain or subdomain:\n\n```STDOUT\n('spin.systems', 'git@gitlab.com:spin-systems/spin-systems.gitlab.io.git')\n('cal', 'git@gitlab.com:qu-cal/qu-cal.gitlab.io.git')\n('log', 'git@gitlab.com:spin-log/spin-log.gitlab.io.git')\n('conf', 'git@gitlab.com:qu-conf/qu-conf.gitlab.io.git')\n('pore', 'git@gitlab.com:qu-pore/qu-pore.gitlab.io.git')\n('ocu', 'git@gitlab.com:naiveoculus/naiveoculus.gitlab.io.git')\n('arc', 'git@gitlab.com:appendens/appendens.gitlab.io.git')\n('qrx', 'git@gitlab.com:qu-arx/qu-arx.gitlab.io.git')\n('erg', 'git@gitlab.com:spin-erg/spin-erg.gitlab.io.git')\n('opt', 'git@gitlab.com:spin-opt/spin-opt.gitlab.io.git')\n('poll', 'git@gitlab.com:qu-poll/qu-poll.gitlab.io.git')\n('arb', 'git@gitlab.com:spin-arb/spin-arb.gitlab.io.git')\n('reed', 'git@gitlab.com:qu-reed/qu-reed.gitlab.io.git')\n('noto', 'git@gitlab.com:qu-noto/qu-noto.gitlab.io.git')\n('plot', 'git@gitlab.com:qu-plot/qu-plot.gitlab.io.git')\n('doc', 'git@gitlab.com:spin-doc/spin-doc.gitlab.io.git')\n('labs', 'git@gitlab.com:qu-labs/qu-labs.gitlab.io.git')\n```\n\nas well as a DataFrame which is modified by the `ql.ssm.check_manifest()` to include 'live' views on\nthe repos (note that this method takes a `add_before_check=True` argument, which controls whether\n`git add --all` is run on each repo to check if it's 'dirty').\n\n```py\n>>> ssm.repos_df\n          domain     repo_name    branches                                                 git_url\n0   spin.systems  spin-systems  master www  git@gitlab.com:spin-systems/spin-systems.gitlab.io.git\n1            cal        qu-cal  master www              git@gitlab.com:qu-cal/qu-cal.gitlab.io.git\n2            log      spin-log  master www          git@gitlab.com:spin-log/spin-log.gitlab.io.git\n3           conf       qu-conf  master www            git@gitlab.com:qu-conf/qu-conf.gitlab.io.git\n4           pore       qu-pore  master www            git@gitlab.com:qu-pore/qu-pore.gitlab.io.git\n5            ocu   naiveoculus  master www    git@gitlab.com:naiveoculus/naiveoculus.gitlab.io.git\n6            arc     appendens  master www        git@gitlab.com:appendens/appendens.gitlab.io.git\n7            qrx        qu-arx  master www              git@gitlab.com:qu-arx/qu-arx.gitlab.io.git\n8            erg      spin-erg  master www          git@gitlab.com:spin-erg/spin-erg.gitlab.io.git\n9            opt      spin-opt  master www          git@gitlab.com:spin-opt/spin-opt.gitlab.io.git\n10          poll       qu-poll  master www            git@gitlab.com:qu-poll/qu-poll.gitlab.io.git\n11           arb      spin-arb  master www          git@gitlab.com:spin-arb/spin-arb.gitlab.io.git\n12          reed       qu-reed  master www            git@gitlab.com:qu-reed/qu-reed.gitlab.io.git\n13          noto       qu-noto  master www            git@gitlab.com:qu-noto/qu-noto.gitlab.io.git\n14          plot       qu-plot  master www            git@gitlab.com:qu-plot/qu-plot.gitlab.io.git\n15           doc      spin-doc  master www          git@gitlab.com:spin-doc/spin-doc.gitlab.io.git\n16          labs       qu-labs  master www            git@gitlab.com:qu-labs/qu-labs.gitlab.io.git\n>>> ssm.check_manifest()\n          domain     repo_name    branches                                                 git_url  branch  local  clean\n0   spin.systems  spin-systems  master www  git@gitlab.com:spin-systems/spin-systems.gitlab.io.git     www   True   True\n1            cal        qu-cal  master www              git@gitlab.com:qu-cal/qu-cal.gitlab.io.git     www   True   True\n2            log      spin-log  master www          git@gitlab.com:spin-log/spin-log.gitlab.io.git     www   True   True\n3           conf       qu-conf  master www            git@gitlab.com:qu-conf/qu-conf.gitlab.io.git     www   True   True\n4           pore       qu-pore  master www            git@gitlab.com:qu-pore/qu-pore.gitlab.io.git     www   True   True\n5            ocu   naiveoculus  master www    git@gitlab.com:naiveoculus/naiveoculus.gitlab.io.git     www   True   True\n6            arc     appendens  master www        git@gitlab.com:appendens/appendens.gitlab.io.git     www   True   True\n7            qrx        qu-arx  master www              git@gitlab.com:qu-arx/qu-arx.gitlab.io.git     www   True   True\n8            erg      spin-erg  master www          git@gitlab.com:spin-erg/spin-erg.gitlab.io.git     www   True   True\n9            opt      spin-opt  master www          git@gitlab.com:spin-opt/spin-opt.gitlab.io.git     www   True   True\n10          poll       qu-poll  master www            git@gitlab.com:qu-poll/qu-poll.gitlab.io.git  master   True   True\n11           arb      spin-arb  master www          git@gitlab.com:spin-arb/spin-arb.gitlab.io.git     www   True   True\n12          reed       qu-reed  master www            git@gitlab.com:qu-reed/qu-reed.gitlab.io.git     www   True   True\n13          noto       qu-noto  master www            git@gitlab.com:qu-noto/qu-noto.gitlab.io.git     www   True   True\n14          plot       qu-plot  master www            git@gitlab.com:qu-plot/qu-plot.gitlab.io.git     www   True   True\n15           doc      spin-doc  master www          git@gitlab.com:spin-doc/spin-doc.gitlab.io.git     www   True   True\n16          labs       qu-labs  master www            git@gitlab.com:qu-labs/qu-labs.gitlab.io.git     www   True   True\n```\n\nIn this example, the `poll` repo is on the master branch, and the rest are on the www (web deploy) branch.\n\nObviously this can then be used to clone the repositories locally\n(or address them for any other `git`-related task)\n\n- One nice feature of GitLab (which at the time of writing GitHub doesn't\n  provide to my knowledge) is that these repos can all be private, and only\n  the static site will be hosted publicly (specified in 'Settings' > 'General')\n\nTo clone a given repo (testing has all been with SSH URLs), there is the `ql.clone()` function,\nand subsequently the namespace can be `refresh`ed to reflect the new addition (this is\ndone automatically within the `clone` function).\n\n```py\n>>> ql.ns\n{}\n>>> ql.clone(ql.ssm.repos_df.git_url[0], \"spin.systems\")\nCloning into 'spin.systems'...\nremote: Enumerating objects: 6, done.\nremote: Counting objects: 100% (6/6), done.\nremote: Compressing objects: 100% (6/6), done.\nremote: Total 236 (delta 1), reused 0 (delta 0), pack-reused 230\nReceiving objects: 100% (236/236), 34.16 KiB | 210.00 KiB/s, done.\nResolving deltas: 100% (123/123), done.\n>>> ql.ns\n{'spin.systems': 'https://gitlab.com/spin-systems/spin-systems.gitlab.io'}\n```\n\nLastly, the entire manifest of repos can be sourced from `ssm` and `clone`d into the\n`ns_path` directory. This is done on CI to build each site when a change takes place\nin one of the source repos or the quill repo (the 'engine').\n\n```py\nql.source_manifest()\n```\n\nFor now, if the directory named as the `domain` entry of the row in the `ssm.repos_df`\ntable exists, it will simply not touch it. If it doesn't exist, it will try to clone it.\n\nEt voila the namespace now contains all the repos (stored in the sibling `ss` directory)\n\n```py\n>>> pprint(ql.ns)\n{'arb': 'https://gitlab.com/spin-arb/spin-arb.gitlab.io',\n 'arc': 'https://gitlab.com/appendens/appendens.gitlab.io',\n 'cal': 'https://gitlab.com/qu-cal/qu-cal.gitlab.io',\n 'conf': 'https://gitlab.com/qu-conf/qu-conf.gitlab.io',\n 'doc': 'https://gitlab.com/spin-doc/spin-doc.gitlab.io',\n 'erg': 'https://gitlab.com/spin-erg/spin-erg.gitlab.io',\n 'labs': 'https://gitlab.com/qu-labs/qu-labs.gitlab.io',\n 'log': 'https://gitlab.com/spin-log/spin-log.gitlab.io',\n 'noto': 'https://gitlab.com/qu-noto/qu-noto.gitlab.io',\n 'ocu': 'https://gitlab.com/naiveoculus/naiveoculus.gitlab.io',\n 'opt': 'https://gitlab.com/spin-opt/spin-opt.gitlab.io',\n 'plot': 'https://gitlab.com/qu-plot/qu-plot.gitlab.io',\n 'poll': 'https://gitlab.com/qu-poll/qu-poll.gitlab.io',\n 'pore': 'https://gitlab.com/qu-pore/qu-pore.gitlab.io',\n 'qrx': 'https://gitlab.com/qu-arx/qu-arx.gitlab.io',\n 'reed': 'https://gitlab.com/qu-reed/qu-reed.gitlab.io',\n 'spin.systems': 'https://gitlab.com/spin-systems/spin-systems.gitlab.io'}\n```\n\nAt the end of `source_manifest`, the `ssm.repos_df` DataFrame is updated with a column `local`\nindicating whether each domain in the manifest is now in the `ns` namespace (i.e. whether a\nlocal repo has been created), via the `check_manifest` method which `ssm`'s `MMD` class inherits\nfrom the `Doc` class.\n\n- This `update_manifest` method will be expanded to supplement the `repos_df` DataFrame with\n  other information worth knowing to do with the `git` status of the repo in question, for those\n  which are locally available. This ensures no unnecessary computation is done before the extra\n  information is needed.\n\nThe next thing we can do (having established that these are now cloned locally) is to read the CI YAML\nas the 'layout' for each site, checking they're valid (according to the\n[reference](https://docs.gitlab.com/ee/ci/yaml/#pages) on YAML configs for GitLab Pages)\n\n```py\n>>> manifests = ql.yaml_manifests(as_dicts=False)\n>>> for k,m in manifests.items(): print(k, end=\"\\t\"); pprint(m)\nspin.systems    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\ncal     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nlog     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nconf    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\npore    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nocu     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\narc     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nqrx     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nerg     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nopt     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\npoll    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\narb     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nreed    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nnoto    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nplot    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\ndoc     SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\nlabs    SiteCI: PagesJob: {Stage.Deploy, Script <subdirectory='site'>, Artifacts <paths=['public']>, Only <branch=['www']>}\n```\n\n- Obviously these could all be made more elaborate for less trivial scripts, this is a first draft showing basic functionality and to enforce/check standardisation across all repos\n- This setup is deliberately brittle, so any changes will need to be validated in the `fold.yaml_util` module,\n  and so the library itself incorporates testing (simple `assert` statements based on a clear expected implementation)\n\nThe build directory can be set with `change_build_dir`, and using this I set all of the repos to\nbuild from \"site\" (but this can be changed at a later date):\n\n```py\nfor d in ql.alias_df.domain: ql.change_build_dir(d, \"site\")\n```\n\u21e3\n```STDOUT\nMoved build path for log from 'site' --> /home/louis/spin/ss/log/site\nCreated build path for ocu at /home/louis/spin/ss/ocu/site\nMoved build path for arc from 'site' --> /home/louis/spin/ss/arc/site\nCreated build path for erg at /home/louis/spin/ss/erg/site\nCreated build path for opt at /home/louis/spin/ss/opt/site\nCreated build path for arb at /home/louis/spin/ss/arb/site\nCreated build path for doc at /home/louis/spin/ss/doc/site\nCreated build path for cal at /home/louis/spin/ss/cal/site\nMoved build path for conf from 'docs' --> /home/louis/spin/ss/conf/site\nCreated build path for pore at /home/louis/spin/ss/pore/site\nCreated build path for qrx at /home/louis/spin/ss/qrx/site\nCreated build path for poll at /home/louis/spin/ss/poll/site\nCreated build path for reed at /home/louis/spin/ss/reed/site\nCreated build path for noto at /home/louis/spin/ss/noto/site\nCreated build path for plot at /home/louis/spin/ss/plot/site\nCreated build path for labs at /home/louis/spin/ss/labs/site\n```\n\nTo commit these changes, I added some more functions to manage the `git` repos.\n`ql.ssm.check_manifest()` now has a column referring to whether the working tree\nis clean or has changes to tracked files not staged for commit.\n\nThe output will be something like this example (where the README in `arc`\nwas moved):\n\n```py\nql.remote_push_manifest()\n```\n\u21e3\n```STDERR\nSkipping 'repo_dir=/home/louis/spin/ss/spin.systems' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/cal' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/log' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/conf' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/pore' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/ocu' (working tree clean)\nCommit [repo_dir=/home/louis/spin/ss/arc] \u2836 Renamed site/README.md -> README.md\n\u21e2 Pushing \u2836 origin\nSkipping 'repo_dir=/home/louis/spin/ss/qrx' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/erg' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/opt' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/poll' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/arb' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/reed' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/noto' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/plot' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/doc' (working tree clean)\nSkipping 'repo_dir=/home/louis/spin/ss/labs' (working tree clean)\n```\n\nThis function takes a `refspec` argument which indicates a particular path to add and push in each repo,\na `specific_domains` argument which can be a string of a single domain, or list of multiple,\nand will be evaluated as the list of all domains if left as `None`.\n\nRunning `ssm.check_manifest()` again is required to update `ssm.repos_df`.\n\nThis `repos_df` dataframe is also useful for comparing whatever\nother properties you might want to check, e.g. which have a README\n\n```py\n>>> df = ql.ssm.repos_df\n>>> df[\"has_README\"] = [\"README.md\" in [x.name for x in (ql.ns_path / d).iterdir()] for d in df.domain]\n>>> df\n          domain     repo_name    branches  ... local clean  has_README\n0   spin.systems  spin-systems  master www  ...  True  True        True\n1            cal        qu-cal  master www  ...  True  True       False\n2            log      spin-log  master www  ...  True  True        True\n3           conf       qu-conf  master www  ...  True  True        True\n4           pore       qu-pore  master www  ...  True  True       False\n5            ocu   naiveoculus  master www  ...  True  True        True\n6            arc     appendens  master www  ...  True  True        True\n7            qrx        qu-arx  master www  ...  True  True       False\n8            erg      spin-erg  master www  ...  True  True       False\n9            opt      spin-opt  master www  ...  True  True       False\n10          poll       qu-poll  master www  ...  True  True       False\n11           arb      spin-arb  master www  ...  True  True       False\n12          reed       qu-reed  master www  ...  True  True       False\n13          noto       qu-noto  master www  ...  True  True       False\n14          plot       qu-plot  master www  ...  True  True        True\n15           doc      spin-doc  master www  ...  True  True       False\n16          labs       qu-labs  master www  ...  True  True       False\n```\n\nObviously this is the kind of thing to then follow up manually,\nbut it helps to have programmatic ways to view the set of directories.\n\nIf after reviewing `ssm.repos_df` you want to push, you can do so\neither with an automated commit message or by passing it as the `commit_msg`\nargument to `remote_push_manifest` (which will reuse the same commit message\nif multiple repos are not clean).\n\n- Note you can always manually go in and check the `git diff` beforehand\n\n## `static`, `src`, and `wire`\n\nTo build all sites with a `src` and/or `static` directory, run `ql.fold.cut.standup()`.\nThis builds templates from the `src` folder with `staticjinja`, and the static files\nare just copied over (directly under `site/`).\n\nTo build all sites with a wire config, run `ql.fold.wire.standup()`.\n\n<details><summary>More details</summary>\n\n<p>\n\nIn fact, `standup` returns a dictionary of the domains, though for now\nonly one domain is in use with wires.\n\n```py\nemitters = ql.fold.wire.standup(verbose=False)\nemitters\n```\n\u21e3\n```STDOUT\n{'poll': <quill.fold.wire.emitters.WireEmitter object at 0x7f304980eb20>}\n```\n\n</p>\n\n</details>\n\nThen to push the sites 'live', run `ql.remote_push_manifest(\"Commit message goes here\")`.\n\n## Aliases\n\nThe \"canonical names\" displayed in the README are the aliases, which by and large\nare the same as the domain names.\n\nThese provide the titles of the index pages of each site.\n\nI might make more use of these in future, I originally only needed these\nas it turns out the description on GitHub/GitLab isn't stored in the git repo\nitself (silly as there's a `description` built in to `git`?)\n\nUsing this let me generate a nice README for the spin.systems superrepo:\n\n> # spin.systems\n> \n> spin.systems: [`ss`](https://gitlab.com/spin.systems/spin.systems.gitlab.io)\n> \n> - `cal`: [q \u2836 cal](https://gitlab.com/qu-cal/qu-cal.gitlab.io)\n> - `log`: [\u222b \u2836 log](https://gitlab.com/spin-log/spin-log.gitlab.io)\n> - `conf`: [q \u2836 conf](https://gitlab.com/qu-conf/qu-conf.gitlab.io)\n> - `pore`: [q \u2836 biorx](https://gitlab.com/qu-pore/qu-pore.gitlab.io)\n> - `ocu`: [\u222b \u2836 ocu](https://gitlab.com/naiveoculus/naiveoculus.gitlab.io)\n> - `arc`: [\u222b \u2836 app](https://gitlab.com/appendens/appendens.gitlab.io)\n> - `qrx`: [q \u2836 arx](https://gitlab.com/qu-arx/qu-arx.gitlab.io)\n> - `erg`: [\u222b \u2836 erg](https://gitlab.com/spin-erg/spin-erg.gitlab.io)\n> - `opt`: [\u222b \u2836 opt](https://gitlab.com/spin-opt/spin-opt.gitlab.io)\n> - `poll`: [q \u2836 poll](https://gitlab.com/qu-poll/qu-poll.gitlab.io)\n> - `arb`: [\u222b \u2836 arb](https://gitlab.com/spin-arb/spin-arb.gitlab.io)\n> - `reed`: [q \u2836 reed](https://gitlab.com/qu-reed/qu-reed.gitlab.io)\n> - `noto`: [q \u2836 ruinoto](https://gitlab.com/qu-noto/qu-noto.gitlab.io)\n> - `plot`: [q \u2836 plotspot](https://gitlab.com/qu-plot/qu-plot.gitlab.io)\n> - `doc`: [\u222b \u2836 doc](https://gitlab.com/spin-doc/spin-doc.gitlab.io)\n> - `labs`: [q \u2836 labs](https://gitlab.com/qu-labs/qu-labs.gitlab.io)\n\n## Addresses\n\n\"Spin addresses\" follow the above \"{namespace}\u2836{domain|alias}\" format, and additionally:\n\n- Some (initially only `\u222b\u2836log`) subdomain repos are 'deploy' stage counterparts\n  to local 'dev' stage directories.\n- Some (initially only `\u222b\u2836log`) subdomain repos will be 'addressed' with a date\n  [and a zero-based counter for same-day entries]\n\n```py\n>>> example = \"\u222b\u2836log\u283620\u2836oct\u283625\u28360\"\n>>> eg_addr = ql.AddressPath(example)\n>>> eg_addr\n['\u222b', 'log', '20', 'oct', '25', '0']\n```\n\nThe path has been parsed (\"strictly\" by default) into parts which are\n'typed' strings.\n\n```py\npprint(list(map(type, eg_addr)))\n```\n\u21e3\n```STDOUT\n[<class 'ql.src.quill.scan.address.paths.NameSpaceString'>,\n <class 'ql.src.quill.scan.address.paths.DomainString'>,\n <class 'ql.src.quill.scan.address.paths.YyDigitString'>,\n <class 'ql.src.quill.scan.address.paths.mmmString'>,\n <class 'ql.src.quill.scan.address.paths.DdDigitString'>,\n <class 'ql.src.quill.scan.address.paths.FileIntString'>]\n```\n\nA file path can be obtained from this using `interpret_filepath`,\nwhich is bound to the class as the `filepath` property:\n\n```py\n>>> eg_addr.filepath\nPosixPath('/home/louis/spin/l/20/10oct/25/0_digitalising_spin_addresses.mmd')\n>>> eg_addr.filepath.exists()\nTrue\n>>> ql.mmd(eg_addr.filepath)\nParsed MMD file (Document of 4 blocks)\n```\n\nThis comes in handy when building components of the spin.systems site such as\n[`tap`](https://github.com/lmmx/tap) which can then build parts for a particular domain\nwith\n\n```py\n>>> eg_addr = ql.AddressPath.from_parts(domain=\"poll\", ymd=(2021, 2, 17))\n>>> eg_addr.filepath\nPosixPath('/home/louis/spin/ss/poll/transmission/21/02feb/17')\n```\n\nThis gives a simple date-based interface obeying the storage structure of quill,\nthough unlike files, paths to directories in this way may not exist\n(instead they can be created as needed).\n\n## TODO\n\n- [x] A next step could be a class representing the state of the websites [beyond CI], which can\n  then be cross-referenced against the `repos_df` (but the goal is not to entirely Python-ise\n  the site development, just the management of key aspects to do with the version control on disk)\n- [x] Make a pip installable binary wheel (bdist not currently working with SCM, just sdist)\n- [x] Make package capable of downloading missing data files in the event it is being distributed\n",
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