| Name | scLift JSON |
| Version |
0.0.62
JSON |
| download |
| home_page | None |
| Summary | SCIV: Unveiling the pivotal cell types involved in variant function regulation at a single-cell resolution |
| upload_time | 2025-04-09 02:40:09 |
| maintainer | None |
| docs_url | None |
| author | None |
| requires_python | >=3.10 |
| license | Copyright (c) 2024 Zheng-Min Yu Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
| keywords |
causal variant
fine-mapping
sciv
single-cell epiomics
scatac-seq
|
| VCS |
|
| bugtrack_url |
|
| requirements |
No requirements were recorded.
|
| Travis-CI |
No Travis.
|
| coveralls test coverage |
No coveralls.
|
# SCIV
> SCIV: Unveiling the pivotal cell types involved in variant function regulation at a single-cell resolution
> SCIV: 以单细胞分辨率揭示参与突变功能调节的关键细胞类型
## 1. 介绍
## 2. 上传
> upload
> test
```shell
py -m build
twine check dist/*
twine upload --repository testpypi dist/*
```
> production
```shell
py -m build
twine check dist/*
twine upload dist/*
```
## 3. 使用
```shell
vim ~/.bashrc
export OMP_NUM_THREADS=1
export OPENBLAS_NUM_THREADS=1
source ~/.bashrc
```
> test
```shell
pip3 install -r requirements.txt -i http://mirrors.aliyun.com/pypi/simple/ --trusted-host mirrors.aliyun.com
pip3 install scLift -i https://test.pypi.org/simple/
```
> production
```shell
pip3 install scLift
```
Raw data
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